Gene Rxyl_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1666 
Symbol 
ID4117151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1687207 
End bp1687878 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID638036465 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_644439 
Protein GI108804502 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.260278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGAA AAGAGACGCC GGGTAGCGGT GCGGTGGCGC TCGAGAGGGG CCTCACGCGC 
CGCGGCTTCC TCAAGACCGC CGCGTGGGCC GGGGCGGCCC TCTCGGCGGC CGGGATCGGG 
GGCTTCGGGG TCGCGGTGCG CTACGCGCAC GGCCAGGAGC AGCAGGCCTA CACGACCTAC 
CAGGACCTCA CCGACGCCCA GATCCTGCAG TTCGCCTACC TGCTGGAGCT GCTCGAGGGC 
ACCTTCTACG ACCAGGGGGT GCAGTCCGGG CTGTTCTCCG GCAACGAGCT CTCGCAGATA 
ACCGCCATCC GGGACCACGA GATGGCCCAC GCGGACGCCA TCGCCGGGGT GCTCGGGCAG 
CTCGGGGCCG AGGTGCCCGC GGCGCCGAAC TTCACCTACC CCCAGAACGC CTTCGGCGAC 
CGCAACGCCT TCCTGGAGCT CGCCAACACC TTCGAGCCGG TCGGCATCGG GGCCTACCAG 
GGCGCCGCGC CCGCGCTCGA CAGCAAGGAC ATCCTGGCCT CGGCGATCTC GATCCACAAC 
TCCGAGTGCC AGCACTGGAA CGCCATAAAG ATCCTGCGGG GCGTGCAGCC GCCGAACAAC 
GTGGCCTTCG AGGAGGCCCT GCCCCTGCCG CGGGTGCAGG AGGCGGTCAG GCCGTTCGGG 
ATCACCGGTT AG
 
Protein sequence
MYGKETPGSG AVALERGLTR RGFLKTAAWA GAALSAAGIG GFGVAVRYAH GQEQQAYTTY 
QDLTDAQILQ FAYLLELLEG TFYDQGVQSG LFSGNELSQI TAIRDHEMAH ADAIAGVLGQ 
LGAEVPAAPN FTYPQNAFGD RNAFLELANT FEPVGIGAYQ GAAPALDSKD ILASAISIHN 
SECQHWNAIK ILRGVQPPNN VAFEEALPLP RVQEAVRPFG ITG