Gene Rxyl_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1460 
Symbol 
ID4116809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1480908 
End bp1481414 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content76% 
IMG OID638036252 
Productshikimate kinase 
Protein accessionYP_644234 
Protein GI108804297 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00429425 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGGAGA GGGTGGCCAT CGTGGGGTAT ATGGGCTGCG GCAAGAGCAC CGTGGGGCGG 
CTGCTCGCCG GCCGGCTCGG CGCGGAGTTC GTGGACCTGG ACGAGGCCGT CGCCCGCAGC 
GCCGGGCGCT CTATACCCCT GATCTTCGCC GAGCGCGGGG AGGAGGGCTT CCGCGGGCTC 
GAGCACGGCC AGCTCGCCGA GGCCCTCCGG CCCGGTTCGG CGCCCCGCGT CATAGCCTGC 
GGCGGCGGGG CGGTGCTGCG CGAGGACAAC CGGCGGCTGC TCCGGGAGCG GGCGGCGACG 
GTCTTCCTGG AGGAGGACCT GCGGCGGCTC TACGCCCGGA CCCGCGCCGC GGACCGCCCC 
CTGCGGGGGG CGAGCTTCGA GGAGTTTTGC CGCCGGTACG AGCTCCGGCT GCCCCTCTAC 
CGGGAGGTCG CCGACCTCAC GGTCGGCGTG GACGGCCGGG GCGCGGAGGA GGTCGCCGAG 
GAGATAGCCC GGTGGCTGGG CGCGTAG
 
Protein sequence
MRERVAIVGY MGCGKSTVGR LLAGRLGAEF VDLDEAVARS AGRSIPLIFA ERGEEGFRGL 
EHGQLAEALR PGSAPRVIAC GGGAVLREDN RRLLRERAAT VFLEEDLRRL YARTRAADRP 
LRGASFEEFC RRYELRLPLY REVADLTVGV DGRGAEEVAE EIARWLGA