| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1293 |
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| Symbol | |
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| ID | 4116956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1315610 |
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| End bp | 1316617 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638036081 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_644069 |
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| Protein GI | 108804132 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGAGGT TCCTGCTCCG CTGGCTCGCG GTGCCGCTGG TCGCCCTGCT CGCCGCCGTC
GCGGCGTTTC CGGCGGCCCC CGGGGCCGCG GCGAGCACCT ACGACGGCGA GGAGCTCGAG
GTGCTGCGCC TCATAAACGA GTACCGCCAG CAGAACGGCC TCGAGCCGCT CCTGCTCTCC
GACACCCTCT CGGTGGCCGC CGAGCGCCAC TCGGAGGACA TGGCCCGCTA CGGCTTCTTC
GCCCACGACA CCTACGCCAG CTCCTACTAC CCGGCCGGTT CGGAGCCCTG GGACCGCATG
GCCGCCGAGG GCTACGACTA CAACACCTAC CGCGGCGAGA ACATAGCCGT GGGCTACGAC
ACCGCCGCCG AGGCCTTCGA GGCCTGGCGC GACTCCCCGA GCCACAACGC CGCCATGCTC
GACGGCCGCT ACAGGGTGGT GGGGATCGGC CGGGTCTACG ACCCCGGCTC CGCCTACGGC
TGGTACTGGA CCACGGACTT CGGGGCGGTC GTGGACCCGA GCGCCCACGA GCCCGGGGAT
GAGCCGGGGC GGCGGGCCGG GCCCCGCGAC CGCGCCGGGA TCGAGGACGG CGGCATGGAG
CGTCAGGACG TCTGGCGCCA GCGCGCGAAA GACGGTGCGC GCCTGATCCT GCGCGCCGGG
TACGCCCGGC TCGGCGAGTA CGGTAACGGG CGGGACGAGC TCTCCCAGAG GCTCCGCTAC
GGGCGGGGCG AGCGCCTGGT CTTCCGGCTC CGGGTGATCC CCCGCGGCGG CCTGCCCGAC
GGCGACCGGC TCGCGGTGCT CCTCACCGAC GGCGAGGGCC GCGTCCTGGC GCGCCTCGCG
CGTTACGCGC CCTCCGACCT CCCGGCGGAC CGCTGGGTGC GGCGGAGCCT CCGGCTCCCG
GAGGGCCTGG CCGGCCGGAA CCTCCGCCTG AGCTTCCGCG CGGTGACCGA CGGCGAGAGG
CTCACCGCCT TCCACCTGGA CGGCGTGCGG CTCCGGCCCG TCCCCTGA
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| Protein sequence | MMRFLLRWLA VPLVALLAAV AAFPAAPGAA ASTYDGEELE VLRLINEYRQ QNGLEPLLLS
DTLSVAAERH SEDMARYGFF AHDTYASSYY PAGSEPWDRM AAEGYDYNTY RGENIAVGYD
TAAEAFEAWR DSPSHNAAML DGRYRVVGIG RVYDPGSAYG WYWTTDFGAV VDPSAHEPGD
EPGRRAGPRD RAGIEDGGME RQDVWRQRAK DGARLILRAG YARLGEYGNG RDELSQRLRY
GRGERLVFRL RVIPRGGLPD GDRLAVLLTD GEGRVLARLA RYAPSDLPAD RWVRRSLRLP
EGLAGRNLRL SFRAVTDGER LTAFHLDGVR LRPVP
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