| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1210 |
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| Symbol | |
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| ID | 4116272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1230989 |
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| End bp | 1232023 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638036000 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_643988 |
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| Protein GI | 108804051 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTCT CGGAGCTGGC CTTCCCCTTC GGCATCGTGG TGGGGGCGGT GCTCCTGGGG
TTCGTCTTCG AGCTGGTCGT CCTGAGAAAG CTGCGGGAGC TCGCCGCCTC GACCACCTTC
CGGGGCGACG ACCTGGTGAT CGGGGCGGTC AAGGGCGTGA CGACCCTGTG GTTCGGGATA
GCCGGGGTCT ACCTGGCGCT CGTAAGGCTC CCGCTGGCCC CGGCGGTGGC CTCCCTGCTC
AGGGATCTTT TGCTCGCGGC GCTCATCCTC TCCGGCGTCA TAGTGCTGGC CCGGATAGCC
GCGAGGCTCG TCGGCTTCTA CGCCGGCCGG ATACAGGGGA TGCCCTCCTC CTCGCTGCTG
ACCAACCTGG CCAGGATCAC CGTGCTGGTG CTCGGGGTGC TCGTGATCCT GCAGTCGCTC
GGGATAGCGA TCGGGCCGCT CATCGCGGCC CTCGGGGTCG GGGGGCTGGC GGTGGCCCTG
GCGATGCAGG AGACGCTCTC CAACCTCTTC AGCGGGGTGA TGATCATCGC CTCCCGCCAG
CTGCGGCCCG GGGACTTCGT CCGGCTGGAC TCCGGCGAGG AGGGCTACGT GGAGGACGTG
AACTGGCGCA ACACCACCAT CCGCTCGCTG CCGAACAACA TGATCATCGT CCCCAACGCG
CGCCTCGCCC AGTCCATCGT GACGAACTAC TACCAGCCGG AGCGCAAGAT GTCGGTGGTG
GTCCCGGTGG GGGTGAGCTA CGAGAGCGAC CTCTCCCACG TGGAGGAGGT GACCATCGGT
GTGGCCAACG AGGTTATGAC CGAGATCGAG GGCGGCGTCC CGGAGTTCGA ACCTTTTATC
CGGTACAACA ACTTCGGCTC CTACAGCATC GACTTCTCGG TGATCATGCA GACCCGGGAG
GTGGTGGAGC AGTACCGGAT CAAGCACGAG TTCATAAAGC GCCTCCACCG CCGCTACGGG
GAGGAGGGGA TAGAGATCCC CTACCCGGTC ATGACGAACA TCCACGTGGG GGAGGACGCC
CCGGCCCGCC GCTGA
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| Protein sequence | MELSELAFPF GIVVGAVLLG FVFELVVLRK LRELAASTTF RGDDLVIGAV KGVTTLWFGI
AGVYLALVRL PLAPAVASLL RDLLLAALIL SGVIVLARIA ARLVGFYAGR IQGMPSSSLL
TNLARITVLV LGVLVILQSL GIAIGPLIAA LGVGGLAVAL AMQETLSNLF SGVMIIASRQ
LRPGDFVRLD SGEEGYVEDV NWRNTTIRSL PNNMIIVPNA RLAQSIVTNY YQPERKMSVV
VPVGVSYESD LSHVEEVTIG VANEVMTEIE GGVPEFEPFI RYNNFGSYSI DFSVIMQTRE
VVEQYRIKHE FIKRLHRRYG EEGIEIPYPV MTNIHVGEDA PARR
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