| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1178 |
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| Symbol | |
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| ID | 4116823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1204001 |
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| End bp | 1204954 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638035968 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_643956 |
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| Protein GI | 108804019 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0253268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCCGGA TCCTGGTTAC CGGGGCTGCT GGGTTTATCG GGTCGCATCT CGTGGACCGG
CTGCTGGCCG AGGGCTGCGA GGTGGTGGGG GTGGACGCTT TCACCCGCTA CTACCCGCGG
GAGCGGAAGC TGCGCAATCT GTCCTCGGCG GCGGAGAGCG GCCGCTTCCG GCTGGTGGAG
GGGGACCTTC TGGAGCTGGA CCTCGGGCTG CTGCTGCGCG GGGTGGAGGC CGTGGCCCAC
CTGGCGGGCG AGCCCGGGGT CCGCAGCAGC TGGGGGGCGG GCTTCGAGGT CTACCTGCGG
CGCAACGTGC TCTGCACCGA GCGGCTGCTC GAGGCGGTCT GGAGGGCCGG GACGCCGCGC
TTTGTGCTCG CCTCCTCCTC CTCGGTCTAC GGCCCCGACG GCGGCAGGCC CGTCGCGGAG
GACCATCCCC TGCGGCCCGC CTCCCCCTAC GGGCTCTCCA AGCTCTCCGC CGAAGAGCTC
GTCCGGCTCT ACGCCCGCGA GCGGGGGGTG CGGGGGACGG TGCTCCGCTA CTTCACCGTC
TACGGCCCCC GCCAGCGGCC CGAGATGGCC CTCTCGCGGT TTATCGCGGC GGCGCACGCC
GGGCGGCCGG TGGAGGTCTT CGGCGACGGG GGGCAGGTCA GGGACATGAC CTACGTCTCG
GACGCGGTCG AGGCCACCGT GGCGGCGCTG GAGCGGGGGG CGGGGGGCGC GTACAACGTC
GGCGGGGGGG TGCGGGTCTC AGTGCGGGGG ATGCTCGAGG CCGTCCGGGA GGTGACGGGG
CGGCCGGTGG AGGCGGTCTA CGGCGAGGCC GCGGCGGGGG ACGTGCGCTC CACCTGGGCC
GACTCCCGGC GGGCGGAGCG CGAGCTCGGC TACCGTCCGC GGGTGGGGCT TCTGGAGGGG
GTGGCCGCGC AGGCCGAGTG GGCGGCCCGG GAGGCCCTGG CGGCCACCGC CTGA
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| Protein sequence | MARILVTGAA GFIGSHLVDR LLAEGCEVVG VDAFTRYYPR ERKLRNLSSA AESGRFRLVE
GDLLELDLGL LLRGVEAVAH LAGEPGVRSS WGAGFEVYLR RNVLCTERLL EAVWRAGTPR
FVLASSSSVY GPDGGRPVAE DHPLRPASPY GLSKLSAEEL VRLYARERGV RGTVLRYFTV
YGPRQRPEMA LSRFIAAAHA GRPVEVFGDG GQVRDMTYVS DAVEATVAAL ERGAGGAYNV
GGGVRVSVRG MLEAVREVTG RPVEAVYGEA AAGDVRSTWA DSRRAERELG YRPRVGLLEG
VAAQAEWAAR EALAATA
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