| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1094 |
|---|
| Symbol | |
|---|
| ID | 4116115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1126324 |
|---|
| End bp | 1126593 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638035884 |
|---|
| Product | FmdB transcriptional regulator |
|---|
| Protein accession | YP_643872 |
|---|
| Protein GI | 108803935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.176161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCT ACGAGTACAG ATGCGAGAGA GGCCACATCT TTGACGTGAT GCAGCGGATC
TCCGAGCCCC CGCTCGCCGC CTGCCGCGAG TGCGGTGCCC CGGTGCAGAA GGTGCTGCAC
CCGGTGGCGA TCTCCTTCAA GGGCTCGGGC TTCTACTCCA CCGACTACGG GAACGGCTCC
CGCAACGGCG ACTCCAACGG CGCCAAGAAG GAGGGCGGGG AGAAGGCCGC CTCGAAGAAG
GAGCCCGCCG CCTCCAAAAA GGAGGACTAG
|
|---|
| Protein sequence | MPIYEYRCER GHIFDVMQRI SEPPLAACRE CGAPVQKVLH PVAISFKGSG FYSTDYGNGS
RNGDSNGAKK EGGEKAASKK EPAASKKED
|
|---|
| |