Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1038 |
Symbol | |
ID | 4116685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1073628 |
End bp | 1075079 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638035828 |
Product | aromatic-L-amino-acid decarboxylase |
Protein accession | YP_643816 |
Protein GI | 108803879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCGCC GGAGGGCGCA GCAGGACCCG GCGACCCCGC AGCACGAGCG GGCCGACCTC CCCGCGCTCG CCGACCGCGA GGGGGTGCTG GAGGAGCTGG TGCGCGTGAT CTGCGAGGCG TGGGCGTCGT TCGACGTGCC GCGCACCGCG GAGCCGCAGC TCGGCGAGGA GCTGGCCGCG CGCCTCGTCG CGCCGCTGCC CGAGGAGCCC GGCGGGGTTG AGGAGGCCCT CTCCGACGCC GTGCGGGTGC TCGACGCCAG CGTCTCGCCC TCGCGCCCGC TCAACCTCGG CTACATCGGC TCGACGGGCC TCGAGATGGG CGTGCTGGCC TCGGCGCTCG CGGCCACCTA CGACGCGAAC CTCGCCGTCA CGGCGGGAGG GGCGGACCTA GTCGAGGAGC AGGCCCTGCG CTGGCTTTCG GACTTCGTCG GCTTCCCGCT CGCCGAGGGG GCCTTCACGA GCGGCGGCAT GACCTCGAAC CTCACGGCGT TGCTGGCGGC CCGCGAGCGG GCGCTCCCCG GCTCGCGCGC CGGGGGGCTC TACGGTCGCC GGGCGGCGGC CTACTGCTCG GAGGAGGCCC ACCACTCCGT GGTCCGCGCC GTCGAGGTCT GCGGGCTCGG GGGAGGGTCC GTCCGGCGCA TCCCGCTCGA CGGCCGGCGC CGGATGCGCC CGGACGCGCT CGAGGAGGCG CTCTACCAAG ACGTCGCCGC CGGCATTGTG CCCGTCGCCG TGGTTGCGAC CGCGGGCACG ACGCTCACGG GCGCCGTGGA CCCGCTGGAC GAGGTCGCCG ACGTCTGCGA GCGCCACGGC GTGTGGCTGC ACGTGGACGG CGCCTACGGC CTCCCGGCCG CCGCCGTCCC GCAGACCGCT CCGCTCTTCG CCGGGCTCGA GCGTGCCGAC TCGGCGACCG TGGACGCCCA CAAGTGGCTC GGGGTGCAGA AGAGCTGCAG CGCCGTGCTG CTGCGCGAGA CCGGGCGGCT GCGGGCGGCG TTCGGCCACG AGGAGCGCTA CATGCTGCAC GAGGGCGACG TCCCCAACCC GGTGGACCGC ACGCTCGAGT ACTCGCGCCC GCTCCGTTCT TTGAGGCTGT GGATGGCCTT CCGCGTCCAC GGCGCCGCCC AGTACAGGAT CTGGATCCGG CGCACCCTCG AGAACGCCCG GCTGCTCGCC GCCCTCCTGC GCGAGGCGCC CGACTTCGAG CTCCTCCACG AGCCGACGCT CTCCACCGTC TGCTTCCGGC ACCTCCCGCC CGGCGCAGAA GACCCCGACG AGCACAACCT CCGCCTCGCC CGAGAGATGC AGCGCGACGG GCGCGTCTTT CTCGCCCCGG CCTCCGTGGA CGGCCGGGCC TGCCTGCGCG CCTGCTTCGT CAACTTCAGG ACCACGCCCC GCGAGGTCGA GCGCGTGATC TCCGTCGCCC GCGAGCTCGG TGGCCGGCTG GCCCGCCCCT GA
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Protein sequence | MRRRRAQQDP ATPQHERADL PALADREGVL EELVRVICEA WASFDVPRTA EPQLGEELAA RLVAPLPEEP GGVEEALSDA VRVLDASVSP SRPLNLGYIG STGLEMGVLA SALAATYDAN LAVTAGGADL VEEQALRWLS DFVGFPLAEG AFTSGGMTSN LTALLAARER ALPGSRAGGL YGRRAAAYCS EEAHHSVVRA VEVCGLGGGS VRRIPLDGRR RMRPDALEEA LYQDVAAGIV PVAVVATAGT TLTGAVDPLD EVADVCERHG VWLHVDGAYG LPAAAVPQTA PLFAGLERAD SATVDAHKWL GVQKSCSAVL LRETGRLRAA FGHEERYMLH EGDVPNPVDR TLEYSRPLRS LRLWMAFRVH GAAQYRIWIR RTLENARLLA ALLREAPDFE LLHEPTLSTV CFRHLPPGAE DPDEHNLRLA REMQRDGRVF LAPASVDGRA CLRACFVNFR TTPREVERVI SVARELGGRL ARP
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