Gene Rxyl_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1020 
Symbol 
ID4116706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1055891 
End bp1057159 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID638035810 
Productcitrate transporter 
Protein accessionYP_643798 
Protein GI108803861 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCTCT TCGCCGTCGC GGTCTTCGCG GTGGTGCTCG CGCTGTTCGC GCTCGAGCTC 
GTGCACCGCA CGCCCGCCGT GCTGGGCGGG GCCGCGCTGC TCATCATCGC GGGGGCCATC
GCCGAGGAGG AGGCCGTAGA GGCCGTAAAC TGGGAGACGC TGGGGCTCCT GGTGGGGATG
ATGATCCTTG TCGGCATCCT GAAGCACACC GGCCTCTTCA CCTACCTCGC CATAAGGAGC
GCCCAGCTCG CCCGCGGCAG CCCGGGGCGG GTGCTGGTCT ACCTGGGGCT CATCACCGCC
CTGCTCTCCG CCTTTCTGGA CAACGTCACC ACCGTGCTTC TGCTGTTCCC GGTCACGCTC
GTCATCGCCC GCATCCTGGA CCAGGACCCC CTCCCCTTTC TGCTGGTGGA GGTGCTCTGC
TCCAACATCG GCGGCACGGC GACGCTCATC GGCGACCCCC CCAACATCAT CATCGGGACG
GCCACCGGGC TCTCCTTCAA CGCCTTCATC GCGAATCTGG TTTCGCCGGT CGCCGCGACG
CTGCTGCTCA CGCTGGCCAT CCTGTGGGCC GTCTACGGCC GCCGGATGGC GGCCGCCGAG
GAGCAGCGCA AGGGCGTGAT GGCCCAGGAC GCCCGGGCGG CCATCCGGGA CGGGAGGCTG
CTCGTGCGGG CCGGGCTGGT CACCGCGGCC ACCGTGGGGG CCTTCTTCCT GCAGGACCTC
ACGGGCCTCA GCCCGGCGGT GGTCGCCCTC GCCGGGGCGG CGGTGGCCAT GATCGTCTGC
GGCACCCGCG TGGAGCGGTG CCTGGAGGAG GTGGAGTGGC CGACCATCCT GTTCTTCGTG
GGGCTCTTCG TGATGGTCGG GGCGCTCGAG GCCACCGGGG TGGTCGGGGC CATCGCCGAC
GCCCTGGCCT CGGCCTCGGA CTCGCGGGCG GCGACCGCCG CGCTCATCAT CTGGGGCAGC
GGGGCGGCCT CGGCGGTCAT AGACAACATC CCGTTCACCG CGACCATGGT CCCCGTCATA
GAGGAGCTGG GGGCAGCGAA GGGCTACTCC CCGGCCGAGC TCGAGCCGCT GTGGTGGTCG
CTCTCGCTGG GGGCCTGCCT GGGCGGGAAC GCCACGCTCA TCGGGGCCTC GGCCAACCTG
GTGGTGGCCG GGATGAGCGA GCGGGAGGGG ATAGCGTTCA CCTTCTGGCG CTTCACGAAG
GTCGGGCTCC CCCTCACGGC GCTGGCCCTG GCCGTCTCCA CCGCTTACGT CCTGCTCTTC
CAGCTGTAG
 
Protein sequence
MALFAVAVFA VVLALFALEL VHRTPAVLGG AALLIIAGAI AEEEAVEAVN WETLGLLVGM 
MILVGILKHT GLFTYLAIRS AQLARGSPGR VLVYLGLITA LLSAFLDNVT TVLLLFPVTL
VIARILDQDP LPFLLVEVLC SNIGGTATLI GDPPNIIIGT ATGLSFNAFI ANLVSPVAAT
LLLTLAILWA VYGRRMAAAE EQRKGVMAQD ARAAIRDGRL LVRAGLVTAA TVGAFFLQDL
TGLSPAVVAL AGAAVAMIVC GTRVERCLEE VEWPTILFFV GLFVMVGALE ATGVVGAIAD
ALASASDSRA ATAALIIWGS GAASAVIDNI PFTATMVPVI EELGAAKGYS PAELEPLWWS
LSLGACLGGN ATLIGASANL VVAGMSEREG IAFTFWRFTK VGLPLTALAL AVSTAYVLLF
QL