Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1020 |
Symbol | |
ID | 4116706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1055891 |
End bp | 1057159 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638035810 |
Product | citrate transporter |
Protein accession | YP_643798 |
Protein GI | 108803861 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCCTCT TCGCCGTCGC GGTCTTCGCG GTGGTGCTCG CGCTGTTCGC GCTCGAGCTC GTGCACCGCA CGCCCGCCGT GCTGGGCGGG GCCGCGCTGC TCATCATCGC GGGGGCCATC GCCGAGGAGG AGGCCGTAGA GGCCGTAAAC TGGGAGACGC TGGGGCTCCT GGTGGGGATG ATGATCCTTG TCGGCATCCT GAAGCACACC GGCCTCTTCA CCTACCTCGC CATAAGGAGC GCCCAGCTCG CCCGCGGCAG CCCGGGGCGG GTGCTGGTCT ACCTGGGGCT CATCACCGCC CTGCTCTCCG CCTTTCTGGA CAACGTCACC ACCGTGCTTC TGCTGTTCCC GGTCACGCTC GTCATCGCCC GCATCCTGGA CCAGGACCCC CTCCCCTTTC TGCTGGTGGA GGTGCTCTGC TCCAACATCG GCGGCACGGC GACGCTCATC GGCGACCCCC CCAACATCAT CATCGGGACG GCCACCGGGC TCTCCTTCAA CGCCTTCATC GCGAATCTGG TTTCGCCGGT CGCCGCGACG CTGCTGCTCA CGCTGGCCAT CCTGTGGGCC GTCTACGGCC GCCGGATGGC GGCCGCCGAG GAGCAGCGCA AGGGCGTGAT GGCCCAGGAC GCCCGGGCGG CCATCCGGGA CGGGAGGCTG CTCGTGCGGG CCGGGCTGGT CACCGCGGCC ACCGTGGGGG CCTTCTTCCT GCAGGACCTC ACGGGCCTCA GCCCGGCGGT GGTCGCCCTC GCCGGGGCGG CGGTGGCCAT GATCGTCTGC GGCACCCGCG TGGAGCGGTG CCTGGAGGAG GTGGAGTGGC CGACCATCCT GTTCTTCGTG GGGCTCTTCG TGATGGTCGG GGCGCTCGAG GCCACCGGGG TGGTCGGGGC CATCGCCGAC GCCCTGGCCT CGGCCTCGGA CTCGCGGGCG GCGACCGCCG CGCTCATCAT CTGGGGCAGC GGGGCGGCCT CGGCGGTCAT AGACAACATC CCGTTCACCG CGACCATGGT CCCCGTCATA GAGGAGCTGG GGGCAGCGAA GGGCTACTCC CCGGCCGAGC TCGAGCCGCT GTGGTGGTCG CTCTCGCTGG GGGCCTGCCT GGGCGGGAAC GCCACGCTCA TCGGGGCCTC GGCCAACCTG GTGGTGGCCG GGATGAGCGA GCGGGAGGGG ATAGCGTTCA CCTTCTGGCG CTTCACGAAG GTCGGGCTCC CCCTCACGGC GCTGGCCCTG GCCGTCTCCA CCGCTTACGT CCTGCTCTTC CAGCTGTAG
|
Protein sequence | MALFAVAVFA VVLALFALEL VHRTPAVLGG AALLIIAGAI AEEEAVEAVN WETLGLLVGM MILVGILKHT GLFTYLAIRS AQLARGSPGR VLVYLGLITA LLSAFLDNVT TVLLLFPVTL VIARILDQDP LPFLLVEVLC SNIGGTATLI GDPPNIIIGT ATGLSFNAFI ANLVSPVAAT LLLTLAILWA VYGRRMAAAE EQRKGVMAQD ARAAIRDGRL LVRAGLVTAA TVGAFFLQDL TGLSPAVVAL AGAAVAMIVC GTRVERCLEE VEWPTILFFV GLFVMVGALE ATGVVGAIAD ALASASDSRA ATAALIIWGS GAASAVIDNI PFTATMVPVI EELGAAKGYS PAELEPLWWS LSLGACLGGN ATLIGASANL VVAGMSEREG IAFTFWRFTK VGLPLTALAL AVSTAYVLLF QL
|
| |