| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1014 |
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| Symbol | |
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| ID | 4116700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1048660 |
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| End bp | 1049823 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035804 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_643792 |
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| Protein GI | 108803855 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0102767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCC GCGCCGCCAT AGTCCACGAC CGCTCCCTCG AGGAGTACGG CTTCGGGGAG
GACCACCCCT TCAACCCCCT GCGCATCCGG CTGACCCTGG AGCTCTGCGA CGCCCTGGGG
CTGCTCGACG GCTACGATTT CCTCGCCCCC GAGCCCGTCT CCGAGGAGGA GCTCACCTCC
GTGCACACCC TCACCTACGT CCGGATGGTC CAGCAGGCGA GCCGCGGGGC CGGGGACCCG
GAGAGGCTTC TGGACTACGG GCTCGGGACC CCGGACAACC CTCTCTTCGC GGGGATGCAC
GAGGCGTGCA GCCGGGTGGT GGGGGGGACG GTGCTCGCCT GCCGGCTCGT GGCCGCGGGG
GAGGCCGAGC ACGCCATGTG CATCTCCGGG GGGCTGCACC ACGCCCTGCG CTCCAAGGCC
AGCGGCTTCT GCATCTACAA CGACGCCGCG GTGGCCATCG CCCTGCTCAA GCGGGAGCGC
CCGGGCATCC GCGTCGCCTA CGTGGACACC GACGCCCACC ACGGCGACGG GGTGCAGTGG
ATGTTCTACG AGGACCCGGA GGTGCTGACG GTCTCGATGC ACGAGTCCGG GCGCTACCTC
TTCCCCGGCA CCGGCGGGGT GGACGAGAAA GGCCGCGGCG CGGGCGCGGG CTACTCGGTC
AACGTGCCGC TGGAGCCCTT CACCGGGGAC GACTCCTGGA TCGAGTGCTT CGAGGCCGTC
GTCCCCGAGG TGCTGCGGGC GTTCGGGCCG GACCTGATCG TCTCCCAGAA CGGGTGCGAC
GGGCACGCCC TGGACCCCCT GACCCACCTG TGCGCCACCA CCCGGCTCTA CGAGCACATC
CCCCGCCGCA TGCACGAGCT GGCGCACGAG CTGTGCGGCG GGCGCTGGGT TGCGCTGGGG
GGAGGCGGCT ACGACCACTG GCGGGTCGTC CCGCGCGCCT GGAGCGCGCT GTGGGCCGCC
GTCTCCCACC GGCCGCTCCC GGAGCGGCTG CCGGAGGGCT GGCTGCTGGA GCACGCCCAG
CACAGCCCCG TGGAGCTGCC GCGCCTGATG CGCGACGACC CGGCGGACTA CCCGCCCGTT
CCCCGCATAA AGGAGATAGA GGCGGCCAAC CGCCGCGCCG CCGAGGCCGC CCTAAAGACC
GTGCTGCACC TCATCCGGCG CTGA
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| Protein sequence | MSGRAAIVHD RSLEEYGFGE DHPFNPLRIR LTLELCDALG LLDGYDFLAP EPVSEEELTS
VHTLTYVRMV QQASRGAGDP ERLLDYGLGT PDNPLFAGMH EACSRVVGGT VLACRLVAAG
EAEHAMCISG GLHHALRSKA SGFCIYNDAA VAIALLKRER PGIRVAYVDT DAHHGDGVQW
MFYEDPEVLT VSMHESGRYL FPGTGGVDEK GRGAGAGYSV NVPLEPFTGD DSWIECFEAV
VPEVLRAFGP DLIVSQNGCD GHALDPLTHL CATTRLYEHI PRRMHELAHE LCGGRWVALG
GGGYDHWRVV PRAWSALWAA VSHRPLPERL PEGWLLEHAQ HSPVELPRLM RDDPADYPPV
PRIKEIEAAN RRAAEAALKT VLHLIRR
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