| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0934 |
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| Symbol | |
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| ID | 4116776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 971383 |
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| End bp | 972444 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638035719 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_643713 |
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| Protein GI | 108803776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.876847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAGC CAGCACGGTG GCCGGTCGTC GCGGCCTGTC TCGTGGTCTC GTTCTTCGCG
GCGCTGGGGC TCTCCGCCCC CGCGGCGGCC CAGACCTACG AGGCGGAGGA GCTGGAGGTC
GTGCGCCTGA TCAACGAGTA CCGCCAGCAG AACGGCCTGG AGCCGCTCCT GATCTCGGAC
GCGCTCTCGC GCGCCGCCGA GCGCCACTCG GAGGACATGG GCCGCTACGG CTTCTTCTCG
CACATCACGC AGGCCAGCTC CTACTACCCG GTGGGGGCGG ACCACACGGT GCGCGCCGCG
CAGGAAGGCT ACGACTACGA CACCGCCACC GCGGAGAACC TGGCCTACGG GCAGACGACC
GCGCAGGCGG TCTTCGAGGC CTGGCGCACC TCCCCGGAGC ACAACGCGAA CATGCTGGGC
GACTACCGGG TGGTGGGCGT CGGCCTGGTG TGGGTGGCGG GAACCCCCTA CTGGACGACG
GTCTTCGGCG GCTACGTGGA CCCCTCGGCG GCGCCCGCGG GCGCGGCGCA GCAGACGCCG
GGCGGCGCCG CCGGGGGCGC AACGCAGCAG GAGCGCTCCC CCGCCCCCAC GACGGGCCCC
GAGAAGGCCG CGCCTGCCGG GGAGCCGGTC GCTCGGGAGT CCCGGGGGGA GAAGAAGAGC
GCGCCTCCCG CCCCGGCCCG CACCCCCGCC TCGGCGGCCG CCGGGCAGTA CGCGGACCGC
TCCGGGGAGG CTCCTCCCGC CCGCCGGGAG CGGCAGGAGG AGCCCCGGGA GGCCCGGGCC
CAGTACGTAG ACCCCTCCCG CGAGCAGAGC GCCGCCCCGC CGCCGGACCC GGCGGCGGAA
GCCCCCGAAC GGCGGCCCGC GCGTGAGGAG GCCGGCCCCT CCGGGGGCGC GACCGCTGAG
GGGGATGCGG CCCCCGGCCC GGAGGAGCGC GCCGCGGGTT CCTCCGGCGG CGACTCGGCG
CTCGGGATCG CCGTTCTCCC CGACACCGGG GGGCCGGGGC TCGGGGCGCT CGCCGCGGGG
GCCCTCCTCG CGGCCGGCGG GCTGCTCCGG CTGCGCCGCT AG
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| Protein sequence | MLQPARWPVV AACLVVSFFA ALGLSAPAAA QTYEAEELEV VRLINEYRQQ NGLEPLLISD
ALSRAAERHS EDMGRYGFFS HITQASSYYP VGADHTVRAA QEGYDYDTAT AENLAYGQTT
AQAVFEAWRT SPEHNANMLG DYRVVGVGLV WVAGTPYWTT VFGGYVDPSA APAGAAQQTP
GGAAGGATQQ ERSPAPTTGP EKAAPAGEPV ARESRGEKKS APPAPARTPA SAAAGQYADR
SGEAPPARRE RQEEPREARA QYVDPSREQS AAPPPDPAAE APERRPAREE AGPSGGATAE
GDAAPGPEER AAGSSGGDSA LGIAVLPDTG GPGLGALAAG ALLAAGGLLR LRR
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