Gene Rxyl_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0929 
Symbol 
ID4117121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp966466 
End bp967164 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID638035714 
ProductGntR family transcriptional regulator 
Protein accessionYP_643708 
Protein GI108803771 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0628731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCCTT CCGCACCCAA CTCCGAGTCT GCGCGGCGCA GGAAGCTCTA CGAGAAGATA 
GCCGCCCACA TCCGCGGGCT CATAGCCAGC GGCGAGCTGC GGCCGGGGCA GGCGCTCCCC 
TCCGAGCGCA AGCTGGCCGA GCAGTTCAAG GTCGGCCGGG CGGTGGTGCG GGAGGCCGTA 
CGCCAGCTCG AGGCGCACGG CCTGGTGGAG AGCCGCCACG GCGGCGGCAA CTACGTGCGG 
GAGATCACCA GCGAGCACCT GGTGGCGCCC ATAGCCAGCG TGCTCAGCAA CAGCAAGGCC 
CAGCTGCGCC AGGAGCTGAT GGAGGCCCGC CTGCTCTTCG AGCCGCAGGT GGCGCGCCAG 
GCGGCGGCCC GGGCCGACGA GGGCGACATC CGGCGGCTCG AGGCCGTCAT CCTGCGGCAG 
AAGGAGCGGG TGGAGCGCGG GCAGCCCACC CCCAAGGAGG ACGCCGAATT CCACAGCCTG 
CTCGCCCAGG CGACCCACAA CGCGGTCGTG GAGCGGGTCA TGGAGGTCAT CAACGGGCTG 
CTCGAGGACT CCTACGAGCG GCTCTTCCAG CACGGGGAGC GCTCCCGGCG CTCGCTGGAG 
GGCAACAGCC GCATCCTGGA GGCCGTCATG CAGCACGACC AGGAGGCCGC CGAGCAGGCG 
ATGAGGGAGC ACATCGCCGA CGTCGCCCGC AGCCTCTGA
 
Protein sequence
MGPSAPNSES ARRRKLYEKI AAHIRGLIAS GELRPGQALP SERKLAEQFK VGRAVVREAV 
RQLEAHGLVE SRHGGGNYVR EITSEHLVAP IASVLSNSKA QLRQELMEAR LLFEPQVARQ 
AAARADEGDI RRLEAVILRQ KERVERGQPT PKEDAEFHSL LAQATHNAVV ERVMEVINGL 
LEDSYERLFQ HGERSRRSLE GNSRILEAVM QHDQEAAEQA MREHIADVAR SL