| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0758 |
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| Symbol | |
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| ID | 4116894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 789628 |
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| End bp | 791199 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638035542 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_643538 |
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| Protein GI | 108803601 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.245711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACA AGGGGTCTCT GCGGACGGAG GAGCCGATCT TGGACGGGAA GCTGAGCTGC
GACTATCTGG TGCTCGGGGG AGGGACGGCC GGGGCGGTGG TGGCCGCCCG GCTCGCGGAG
GAGACGGAGG CCGAGGTGGT GCTCGTGGAG GCGGGGCCCT CCGACGAGGG CGACTGGCGG
GTGCTCGAGC TCTGGAACTG GCCGAACCTG CTCGGCACCG ACTTCGACTA CGACTACACC
ATAGAGCCGC AGGAGCGGGG CAACAGCCTC ATCCGGCACA GCCGGGGGAA GGTGCTCGGG
GGGTGTAGCT CGCACAACTC GGCCATCGCC TTCCGGGCGC CGGACTACGA CCTCGAGGTC
TGGGAGCGCT CCGGGGCGGC GGGGTGGGGG CCTGAGGGCA CCCGCCCGTA CTACGACCGG
GTCTTCGACC GGGTGCACGT GGAGACCATC CCGCCGGACA ACACCTGCAC CGCCGCCTTC
GTCGAGGCCG CGGTGCAGGC GGGCTACCCG CTCATCCGCT TCAACGAGGA GGAGCTGCGG
GAGGGGGTGG GCTGGCTGCA GATAAACGCC CGGGCGGGCA TCCGGCAGTC CAGCTCGGTG
GCCTACCTCC ACCCGCTCGG GCGCCTGCCG AACCTCACCG TCCTCACCGA GACCCGGGTC
TTGCGGGTCC TGCTCGACGG CGGCGGGGAG GCGGTCGGGG CCGAGACCTC GCGCGGGACC
ATCCGCGCCC GGGGCGAGGT CATCCTCTGC TGCGGGGCCT TCGACTCGCC CAAGCTGCTC
ATGCTCTCCG GCATAGGGCC GGAGGAGCAC CTGCGGGAGG CGGGCGTCCC GTGCCGGGTC
GATCTCCCCG GGGTGGGGGA GCACCTGCTC GACCATCCCG AGGGGGTGGT CATCTGGGAG
GCCAGCCGCC CCATTCCGCC CATCTCCCGC CAGGGCTGGG AGGCGGCGCT CTTCGCCCGG
GTCGACCCGG CCTCCGAGGT GCCGGACCTC ATGTTCCACT TCGGGACCAG CGCCTTCGAC
ATCAACACCT CGCAGCTCGG CTACCCCAGC GCCGAGCACG CCTTCAGCCT CACCCCCAAC
GTCATGCGGG CCAGGAGCGA GGGCTTCGTC CGGCTGCGCT CCTCCGACCC GGCGGCCCCC
CCGGTCATAG ACTTCCGCTA CTTCACCGAC CCCGACGGGT ACGACGACTG GATCATGACC
GAGGGCGTCA AGCTGGCGCG CAGGATCGCC GAGCAGCCCG CGCTGCGGCC CTGGGTGAGG
CGCGAGCTCG CGCCGGGACC CAACGTGAGG GACGACGGGC AGGTCTCCGA GTACGCGCGG
CGCAGCGCCA ACACCGTCTA CCACCCCGCC GGCACCTGCC GCATGGGGGC GCCGGACGAC
CCGGCGGCGG TCGTGGACCC GCAGCTGCGG GTGCGGGGGG TGGGGAGGCT GAGGGTGGCC
GACGCCTCCG TCTTCCCCAC CATGATCGGG ACGAACCCCT GCATCACCTG CATGATGATC
GGGGAGAAGT GCGCGGACCT CGTTCTGGGG GCCGACGCCG GCACCCTGCA GCCGCGGGAG
CTCGCCCGGT GA
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| Protein sequence | MRNKGSLRTE EPILDGKLSC DYLVLGGGTA GAVVAARLAE ETEAEVVLVE AGPSDEGDWR
VLELWNWPNL LGTDFDYDYT IEPQERGNSL IRHSRGKVLG GCSSHNSAIA FRAPDYDLEV
WERSGAAGWG PEGTRPYYDR VFDRVHVETI PPDNTCTAAF VEAAVQAGYP LIRFNEEELR
EGVGWLQINA RAGIRQSSSV AYLHPLGRLP NLTVLTETRV LRVLLDGGGE AVGAETSRGT
IRARGEVILC CGAFDSPKLL MLSGIGPEEH LREAGVPCRV DLPGVGEHLL DHPEGVVIWE
ASRPIPPISR QGWEAALFAR VDPASEVPDL MFHFGTSAFD INTSQLGYPS AEHAFSLTPN
VMRARSEGFV RLRSSDPAAP PVIDFRYFTD PDGYDDWIMT EGVKLARRIA EQPALRPWVR
RELAPGPNVR DDGQVSEYAR RSANTVYHPA GTCRMGAPDD PAAVVDPQLR VRGVGRLRVA
DASVFPTMIG TNPCITCMMI GEKCADLVLG ADAGTLQPRE LAR
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