Gene Rxyl_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0563 
Symbol 
ID4116744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp591962 
End bp592810 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content50% 
IMG OID638035351 
Productglycosyl transferase family protein 
Protein accessionYP_643349 
Protein GI108803412 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGA AGATCTCCGT ACTCGTTAAT ACTTTGAACG AGGAAGCGAA TATCAGAAAT 
TGTCTAGAGT GTGTCAAGTG GGCCGACGAG ATTGTAGTGG TCGACATGTA CAGCGAAGAC
CGTACCTTGG ATATCGCCCG CGAGTATACA GACAAGGTCT TCCTTCATGA GCGAGTGGAT
TACGTCGAAC CCGCGCGCCG TTATGCTTTA GAGCAAGCGA CAAATGAATG GGTTCTGGTA
GTCGATGCAG ACGAGTTAGT TACGAGGGAG TTGCGAGATA GAATCCTTCA GATCGCTGAG
GAAGATAGGT ATGATGTAGT TTATGTGCCT AGAATTAACT ACTTCTTTGG GCGCGCCATG
AGAGGGACCG GCTGGGCTCC ACTACAAGAC ATGCACGTAC GCTTCTTCAA GAAGTGGTGC
GTACGCTATT CGGACGAGAT ACATTCTCCC GTAGGGGTCG ATCCTTCGGC CCGCGTTTAC
GAGCTCTTGG ACGAGTCGTG TGCGTTCGTG CACTTCAACT ACATCGACGC AGAGCATTTT
ATCGACAAGC TGAATCGCTA CACCACTATC GAAGCGAAGA ACTCCGCTGC TGCAGGAAGG
TCCTTCTCGG GACTAGGCGT ATTGTACGCG GTGCTCAAAG AGGTAGGGTG GCGCTTCTTT
CTGAAGAATG GGTTTAAAGA TGGTTTCCAG GGGCTAGCTT TATCTCTGTT GATGGGTTTT
TATCGCCTGA GTGCCGGGCT GAAGCTATAT CTCATGGAAA GATACTCTAC AGAAAATGTG
CGCGATACCG TTTTGAAGCA GTATGCAAGG ATCGCCGAGC GAGAGATCCG TCGTTATGAG
CAGTCTTGA
 
Protein sequence
MSQKISVLVN TLNEEANIRN CLECVKWADE IVVVDMYSED RTLDIAREYT DKVFLHERVD 
YVEPARRYAL EQATNEWVLV VDADELVTRE LRDRILQIAE EDRYDVVYVP RINYFFGRAM
RGTGWAPLQD MHVRFFKKWC VRYSDEIHSP VGVDPSARVY ELLDESCAFV HFNYIDAEHF
IDKLNRYTTI EAKNSAAAGR SFSGLGVLYA VLKEVGWRFF LKNGFKDGFQ GLALSLLMGF
YRLSAGLKLY LMERYSTENV RDTVLKQYAR IAEREIRRYE QS