Gene Rxyl_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0562 
Symbol 
ID4116743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp590942 
End bp591901 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content53% 
IMG OID638035350 
Producthypothetical protein 
Protein accessionYP_643348 
Protein GI108803411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAA AGATAATTGT ATTGTTTATC GGAGCATGGG GTAGAAGCGG CAGCACGCTT 
CTCGAAAGAA TGTTAGGGCA GATGCCCAGA TTTTTCGCTG TCGGAGAGCT GCGCCACGTG
TGGGATAGAA GCTTCCAAGA TAATCAGCTT TGTGGGTGCG GAAAATCCTT TTATTCCTGT
GAATTCTGGA GAGCAGTCGG CAGTGAAGCT TTTGGTGGCC TCGAGAGGGT CGACGTAGAC
AAAATACTGA CTCTAAAGGC GACTGTTGAT CGGTATCGTT ATATGCCGTG TCATATACGG
GCTTCAAAGA CAGGAAAATA TAACCGGAGG ATGGCCGATG CTGTAAAGGA GTATGCCAGT
CTCCTTGAAC GGTTCTATCG GGCGATACAG GCTGTTTCGG GCGCCGAAGT GATTGTGGAT
TCCTCTAAGG ACCCGCCTTA CGCGTTTTTG CTGAACGCCC TCCCTTTCGT CGACTTGCGC
CTCATCCACC TCGTGCGCGA TAGCCGCGCC GTCGCATACT CGTGGTCAAG AGAAAGAGAG
CGCCCAGAAA TTACCGATCG ACTGGAGCTT ATGCCCAGGT TCGGTCCCGT GATGAGTTCG
TACGGGTGGA ACCTCTACAA TTATTCACTC GGGTTTTTAC GCAGGTTCGT TCCCTCCTCC
GCGTTGCTCC GCTACGAGGA TCTAGTTCAG GGCCCCGACA CGCAGGTTCG GCGGGTGTTG
GAGGAGACAG GATTCGATCA GCCTCTTGCA TTGCCTTTTG TCCATGGGCG GAAAGTTCGG
CTAGGCACGA ACCACACGGT GTCCGGGAAT CCGATGCGCT TCCAAACAGG CATGCTCGAT
CTTCGCCCCG ACGAGGAGTG GAAGACTAAG ATGAGGCGCA CAGATAAGTA CGTCGCTACC
GTTTTGACCG CGCCTTTGCT GCTGAGGTAC AGGTACCTCA GCAGCAAAAG GATTCGATGA
 
Protein sequence
MNPKIIVLFI GAWGRSGSTL LERMLGQMPR FFAVGELRHV WDRSFQDNQL CGCGKSFYSC 
EFWRAVGSEA FGGLERVDVD KILTLKATVD RYRYMPCHIR ASKTGKYNRR MADAVKEYAS
LLERFYRAIQ AVSGAEVIVD SSKDPPYAFL LNALPFVDLR LIHLVRDSRA VAYSWSRERE
RPEITDRLEL MPRFGPVMSS YGWNLYNYSL GFLRRFVPSS ALLRYEDLVQ GPDTQVRRVL
EETGFDQPLA LPFVHGRKVR LGTNHTVSGN PMRFQTGMLD LRPDEEWKTK MRRTDKYVAT
VLTAPLLLRY RYLSSKRIR