| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0406 |
|---|
| Symbol | |
|---|
| ID | 4115227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 436053 |
|---|
| End bp | 436892 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638035195 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_643193 |
|---|
| Protein GI | 108803256 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0129272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGG GCGGGGGAAG GCCGCGGTGG CTCATGGAGG CCATAGCCGT GTGGGGCTAC
GTGCAGAGGA ACTACTTCCT CACCAAGCGG TACTTCATGT GGGAGGTCGT GTGGCTCGTC
TACATCACGG CGAACGCCCT GGCGATCACC TACATCGGCG CCGGCGCGAG CGAGTTCGGC
AGCGGCATAG ACACCGCGCG CCTGATGACC TTCCTGCTGG TGGGGGCGCT CGTCTGGAGC
TACCTCTCGG TGCTCTTCGA CGTGCTCTCG GAGACGGTGA GCTGGGAGCG GTGGGAGGGG
ACCATCGAGT ACACCTTCAT GAGCCCGGCG AGCAGGGTCA CCCACCTGCT CGGGATGGGG
CTCTACGCGG TCATCTACGG CGTCCTCCAG ATCTCGGTGA TGCTCGGGGC GGTCTCGCTC
TTCTTCGAGC TGGACCTCTC GCGGGCCAAC TACGCGGGCG CCCTGCTGGT GCTCGGCGTG
GCGAGCGTCT CGCTGGTGGG CTTCGGCATC ATGGCCGCCG TGCTGCCCCT GCTCTCCCCG
GAGAAGGGCC AGCAGGTGAG CTACATCGTC TCCTCCCTGT TGCTGCTCGT CTCCGGCGTC
TACTACGACG TGGGCGTGCT GCCGGGGTGG ATGCAGTTCA TCGCTCGGTT CTCGCCCGTC
ACGTACGCCC TGGAGGGCAT CCGCGCCGCC CTGCTCGACG GGGCGGGCCT CGCGGAGCTG
CGGGGCAGCG TCGGGGTGCT TCTGGCGATG GGGGCACTCT TCGTGCCGCT CGGGCTCCTC
GTGTTCCACC TCGGCGAGCG CTACGCCAAG AGGACCGGAA AGCTGAAGCG GAGCGGGTAG
|
|---|
| Protein sequence | MIRGGGRPRW LMEAIAVWGY VQRNYFLTKR YFMWEVVWLV YITANALAIT YIGAGASEFG
SGIDTARLMT FLLVGALVWS YLSVLFDVLS ETVSWERWEG TIEYTFMSPA SRVTHLLGMG
LYAVIYGVLQ ISVMLGAVSL FFELDLSRAN YAGALLVLGV ASVSLVGFGI MAAVLPLLSP
EKGQQVSYIV SSLLLLVSGV YYDVGVLPGW MQFIARFSPV TYALEGIRAA LLDGAGLAEL
RGSVGVLLAM GALFVPLGLL VFHLGERYAK RTGKLKRSG
|
|---|
| |