Gene Rxyl_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0370 
Symbol 
ID4115093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp396874 
End bp397545 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID638035160 
ProductTetR family transcriptional regulator 
Protein accessionYP_643158 
Protein GI108803221 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0234884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGC TTCGGCGGCG AGGGATAGGG CGGCCGCCGC TCTCCGGTCC GGAGGCGGAG 
GCCAACCCTC TGAGCGAGCT GAGCTTCGAG GAGCGGCGGG AGCTGTTTCT CGAGGCGGCG 
GTGAGGCTCT TTGAGGAGAA GGGCTACAAG AACACCTCGG TCGAGGACAT CGCCGGGGAG 
CTGGGGTTCA CCAAGAAGGT CTTCTACTAC TACTGGAAGA ACAAGCGGGA GATCGTCCAG 
GAGATCCACG ACCGGGGCAT GGCGCTCATG AACGCGCAGC TGGACGCCGT GCTGGAGGAG 
GAGGGCGCGC CCGACGCCCG GCTGGACGCG GCGATCCGCA ACCACCTCAG GACCGTGCTC 
CGGGACCGTT CCATAGCCGG CACCCTGCTC GGGGACTTCG AGTTCTCCGA GGAGACGCTC 
CGGGCCCGCA GGGAGTACAC CCGGCGCTTT CAGCGGCTCG TGGAGGACGG GATGGCCGCC 
GGCGTGGTCC GAAAGACCGA CCCCAGGATG CTCACCTTCG CCATACTCGG CCTGTGCAAC 
TCCGTGGGCC AGTGGTACAG GCGCGAAGGG CGCCTCACGG ACGAGGAGAT CCTCGACATC 
TTCGCATCCT TCGCCGCCCG GGGATGGCGC GAAGGGGAGC CCGCGGAGGA GCAGAGAGAG 
GGGGGCGGCT AG
 
Protein sequence
MSGLRRRGIG RPPLSGPEAE ANPLSELSFE ERRELFLEAA VRLFEEKGYK NTSVEDIAGE 
LGFTKKVFYY YWKNKREIVQ EIHDRGMALM NAQLDAVLEE EGAPDARLDA AIRNHLRTVL 
RDRSIAGTLL GDFEFSEETL RARREYTRRF QRLVEDGMAA GVVRKTDPRM LTFAILGLCN 
SVGQWYRREG RLTDEEILDI FASFAARGWR EGEPAEEQRE GGG