Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0201 |
Symbol | |
ID | 4117828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 202089 |
End bp | 202808 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638034992 |
Product | hypothetical protein |
Protein accession | YP_642991 |
Protein GI | 108803054 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.114045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGG GCCGGACGCT CCTGGTCGTG GGGGCCCACT CGGCGGACTT CGTGTGGCGC GCGGGCGGGG CCGCGGCCAT AAACGCCGCC GCGGGCGGGC GCTCGGTCGT GCTCGCGCTC TCCTACGGCG AGCGGGGGGA GTCCGGGGAG CTCTGGAAGC GGCCGGACCA GACCGTCGAG AACGTCAAGA GGGTGCGCCA CGCCGAGGCC GAGAAGGCCG CGGGCGCCCT CGGGGCCGAG TTCCGGTGCC TCGACCTCGG GGACTACCCG CTGCGGGTGG ACGAGGAGGC GCTGATGCAC CTCGTCGAGA TCATCCGGGA GCTCGCCCCG GATGTGATCG TCACCCACAC CCCCGAGGAC CCCTTCAACC CCGACCACCC CACCGCCTAC CAGGCCGTCC GGCAGGCGCG GCTGCTCGCC GCCGGGGCCG GGGTCCCGAG CGCCTTCCCG AGCGTGAGGC CGCCGGCCCT CTACCTCTTC GAGCCGCACC AGCCGGAGCT CTGCGGCTTC GTGCCGGACA CCTTCCTGGA TATAACGCGG GTAATGGAGC GCAAGAAGGA GGCGATGGAG GCGATGCAGG CGCAGAGGTA CCTGCAGCAG TACTACCTGC AGCGGGCGGA GCAGCGGGCC AACCACGCCA GGAGGGTCTC GGGCGAGAGC GGGGTGCGCT ACGCCGAGGC CTTCCAGCGG GTCTTGCCGC GGGTGGTGGG CTCGCTGTGA
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Protein sequence | MAEGRTLLVV GAHSADFVWR AGGAAAINAA AGGRSVVLAL SYGERGESGE LWKRPDQTVE NVKRVRHAEA EKAAGALGAE FRCLDLGDYP LRVDEEALMH LVEIIRELAP DVIVTHTPED PFNPDHPTAY QAVRQARLLA AGAGVPSAFP SVRPPALYLF EPHQPELCGF VPDTFLDITR VMERKKEAME AMQAQRYLQQ YYLQRAEQRA NHARRVSGES GVRYAEAFQR VLPRVVGSL
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