Gene Rxyl_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0201 
Symbol 
ID4117828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp202089 
End bp202808 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID638034992 
Producthypothetical protein 
Protein accessionYP_642991 
Protein GI108803054 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGG GCCGGACGCT CCTGGTCGTG GGGGCCCACT CGGCGGACTT CGTGTGGCGC 
GCGGGCGGGG CCGCGGCCAT AAACGCCGCC GCGGGCGGGC GCTCGGTCGT GCTCGCGCTC
TCCTACGGCG AGCGGGGGGA GTCCGGGGAG CTCTGGAAGC GGCCGGACCA GACCGTCGAG
AACGTCAAGA GGGTGCGCCA CGCCGAGGCC GAGAAGGCCG CGGGCGCCCT CGGGGCCGAG
TTCCGGTGCC TCGACCTCGG GGACTACCCG CTGCGGGTGG ACGAGGAGGC GCTGATGCAC
CTCGTCGAGA TCATCCGGGA GCTCGCCCCG GATGTGATCG TCACCCACAC CCCCGAGGAC
CCCTTCAACC CCGACCACCC CACCGCCTAC CAGGCCGTCC GGCAGGCGCG GCTGCTCGCC
GCCGGGGCCG GGGTCCCGAG CGCCTTCCCG AGCGTGAGGC CGCCGGCCCT CTACCTCTTC
GAGCCGCACC AGCCGGAGCT CTGCGGCTTC GTGCCGGACA CCTTCCTGGA TATAACGCGG
GTAATGGAGC GCAAGAAGGA GGCGATGGAG GCGATGCAGG CGCAGAGGTA CCTGCAGCAG
TACTACCTGC AGCGGGCGGA GCAGCGGGCC AACCACGCCA GGAGGGTCTC GGGCGAGAGC
GGGGTGCGCT ACGCCGAGGC CTTCCAGCGG GTCTTGCCGC GGGTGGTGGG CTCGCTGTGA
 
Protein sequence
MAEGRTLLVV GAHSADFVWR AGGAAAINAA AGGRSVVLAL SYGERGESGE LWKRPDQTVE 
NVKRVRHAEA EKAAGALGAE FRCLDLGDYP LRVDEEALMH LVEIIRELAP DVIVTHTPED
PFNPDHPTAY QAVRQARLLA AGAGVPSAFP SVRPPALYLF EPHQPELCGF VPDTFLDITR
VMERKKEAME AMQAQRYLQQ YYLQRAEQRA NHARRVSGES GVRYAEAFQR VLPRVVGSL