Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0010 |
Symbol | |
ID | 4115669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 11928 |
End bp | 12626 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638034802 |
Product | integral membrane protein |
Protein accession | YP_642803 |
Protein GI | 108802866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCG CCGCCGTACT GATCATATTC GGCGTTTACT CTTTCACGGT CATCCTGCTC TACGACGGGG AGTACCGGGA GTACCTCTCG CCCTTCTACT CGCCGCAGGT GGGGCTGCCG GAGTGGGTGC CGGGCTTCAT CACGGCGCCG ATGTTCGTGC TGTGGATACC CCTGGGCTTC AGGGCCACTT GCTACTACTA CCGCAAGGCC TACTACCGGG CCTTCTTCTG GGATCCTCCG GCGTGCCTGG CCGGGGCGCA GAAGCGCGAG CCGCGCAGCC CAGAGAGCTA CCGGGGGGAG CGCGCGCTCT TCGTGATAAA CAACGTCCAC CGGTACTTTC TGTACGGCTC CTGGGTCATC CTGGCCTTTC TCTGGTACGA CACCGTGCTC ACCTTCTTCC CGCCGGAGGG AGGGTTTCAG GTGAAGGTGG GCTCCCTCAT CTGGCTGGCC AACGTGGTGC TGCTCTCCAT GTACAGCTTC TCGTGCCACT CCATGCGCCA CGTCGTCGGG GGGAACAAGG ACTGCTACAC CTGCATCCGC GGGGGCAACG CGCGGCGCAG GCTGTACAAC GCGGTGAGCC GGCAGAACGC CCACCATCCC ACCTGGGCCT GGCTCAGCCT CTTCTCCGTG CTTTTCACCG ATATATACTT GAGGCTCATA GCAGCTGGCG TTATCCCCGA CCTCACGATC ATAGGGTAG
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Protein sequence | MTVAAVLIIF GVYSFTVILL YDGEYREYLS PFYSPQVGLP EWVPGFITAP MFVLWIPLGF RATCYYYRKA YYRAFFWDPP ACLAGAQKRE PRSPESYRGE RALFVINNVH RYFLYGSWVI LAFLWYDTVL TFFPPEGGFQ VKVGSLIWLA NVVLLSMYSF SCHSMRHVVG GNKDCYTCIR GGNARRRLYN AVSRQNAHHP TWAWLSLFSV LFTDIYLRLI AAGVIPDLTI IG
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