Gene Rxyl_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0007 
Symbol 
ID4115666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp9127 
End bp10590 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID638034799 
Producthypothetical protein 
Protein accessionYP_642800 
Protein GI108802863 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGGCG CGCATCCTGA TCTCCGACGA GGACGGCGAG GTGCTCATGG AGTCGCCCGA 
GTACTCCGTC TGGCTCGACG GGACGGACGA CCCGTTCACC GTGGTGGCCG CCTTCGACCT
CCCCGAGGAG TACTTCGACG ACGGCGACCG GGTCCTCTGG GTGGAGGCCG TCCTGGAGGA
GGAGACGCTC TCGCAGACGG CCATAAGGCT CCACGACCGC TACAGTGTCT GAGGAGATTT
GCGGGCCGGG GCCCGGCGGG GCCCCGGCCG CTGCCGAACC GGGAGAGCGA GAACACCATG
CCTGAAGACC TGGCGATCTT TATAGACTGG GAGAACATCT ACATCTCCAC GGTCAGCGAG
TACGGCGCAA AGCCTAACGT CTCGGCCATC CTGGAGAAGG CCCGGGAGTA CGGGCGCATC
GTCTCGGCGA CGGCCTACGC CGACTGGACA GACGGCGAGT TCCGCGACGC CCCGCCCACG
CTGTACTCCA ACGGGATCTC CCCGCGCTAC ATCTCCGCCC GCTACTTTCC GGGCGGCAAG
TCCCAGAAGC GCCGCACCAA CTCCATAGAC GTGATGCTGG CGGTGGAGTG CGTGGACTTC
CTGCACAACC ACCCGCAGGT GGACACCTAC GTGCTGGTGA CCGGCGACGG GGACTTTATC
CCGCTGGTGA ACCTGCTCAG GAGCAGGGGC AAGGTGGTGG TTGTCATCGG GGTCTCCGAG
GCCACCTCCT ACCACCTGAT CGAGTCCGCC GACCACTTTA TCTCCTACGC CTCGCTGCTC
GAAGAGGACC GGGCGGCCCG CGACCGCGAG CGGCGGCCGA AGGGGAAGGA GATAGACCCG
TTCCGCGAGC TGGTGCGGGC GGTCGAAGCC CTCAAGAAGG GCGACAAGAC GCGCGTGCTC
GGACAGGTGA AGCAGCAGAT GATCGTTCAG ATGGGCTCCT TCGACGAGCG GGACCACGGC
TTCAAGAAGT TCAAGGACTT CGTGGTGGAG GCGGAGCGCC GCGGGCTGGT GAAGACGGTG
GACGAGGAGT TCGAGCTGCA CGTCTACCTG CCGGACGAGA AGATCCCGGA GCAGCTCGGG
GCGGACCTGG CCTCCGAGGA GCCCCAGACG GACGGCAGAA GGGAGGGCGG AGCGGGTTTC
GACCTCACGG AGGACCTCAC CCCCTACGAG CTGCGCACCG TCTGCCAGAG CATCGCCGAG
CTCCGCCAGC CGGCCTCCAT GGTGGAGATC CTCAGCCGCC TGCGCGAGCT GGGCGAGCGC
GGCGAGCTGG AGCTCTCCCG CGAGGAGATG GTGGAGGTCG TGGAGGCCCT GCTGGATGCC
GGATACCTAA ACCCGGTCCG CGAACGCCCC TACAAGGGGG CCAGGGCCGA CATGACCCTC
TACGCGCTCG ACACCGAGAG CAGGCAGGTG CGCAACATCC TGAAGGAACC CGCCGAGGCC
GCCGCTCAGT CGGCCAGCCG GTAG
 
Protein sequence
MEGAHPDLRR GRRGAHGVAR VLRLARRDGR PVHRGGRLRP PRGVLRRRRP GPLGGGRPGG 
GDALADGHKA PRPLQCLRRF AGRGPAGPRP LPNRESENTM PEDLAIFIDW ENIYISTVSE
YGAKPNVSAI LEKAREYGRI VSATAYADWT DGEFRDAPPT LYSNGISPRY ISARYFPGGK
SQKRRTNSID VMLAVECVDF LHNHPQVDTY VLVTGDGDFI PLVNLLRSRG KVVVVIGVSE
ATSYHLIESA DHFISYASLL EEDRAARDRE RRPKGKEIDP FRELVRAVEA LKKGDKTRVL
GQVKQQMIVQ MGSFDERDHG FKKFKDFVVE AERRGLVKTV DEEFELHVYL PDEKIPEQLG
ADLASEEPQT DGRREGGAGF DLTEDLTPYE LRTVCQSIAE LRQPASMVEI LSRLRELGER
GELELSREEM VEVVEALLDA GYLNPVRERP YKGARADMTL YALDTESRQV RNILKEPAEA
AAQSASR