| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4071 |
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| Symbol | |
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| ID | 4895003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009040 |
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| Strand | + |
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| Start bp | 9069 |
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| End bp | 10367 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640110473 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001041785 |
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| Protein GI | 126464809 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 0.0000586904 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 0.188824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGGC TCGCGCCCGA GGCCCTGGCC TACCAGTCGC CGCTCGAACG GATCCGGCAC
GAGCCGCTGC CCTGGCTGCT CCGGCTCTGG CCCTTCGGGG CGGGGGCGCT GCTGGCGGCG
CTGGTGGGGC TTGCGGCCCT CCTGCCCATC GATGTGGTGG TGAGCGCGGC GGGCCGGATC
GCGGCCGACG ATCCGGCCGC GGTCCTGCGT CCGGTGACGG CCGCGGTGCT GCGCAGCCTC
CTTGTGCGGC CGGGGGATCT GGTGGCGCCG GGCCAGCTGC TCGCGCGGCT GGACAGCCGG
ACCTCCGACG CCGATGCCGC ACAGCTGAAG GCGCAGGCCG CCGCCCTCTC GGCGCGGATC
GCGCGGATCG AGGCCGAGCT GGCGGGTCGG CCGCTCGCGG GCGCGGGCCC CGACCGCGCG
CTCGAAGGCC GCATCCAGTC CGGCCGCGCC GCGACCGAGA CCGCGCTGCG CCGCGGACTC
GAGGCCGATC TCGCCCGGAT CGACCGCGGC ATCGAGGCTG CGCGCGCCGA GCGGCCGGCG
CTGGCCGAGA CGCTCGCCAC GGCGCGCGAG CTCGAGGCGA TGCGCGAGCG GCTGATGACG
ACGCAGAACG GCACCCGGGC GGCCTTCGTC GAGACGCGGC TCGCGCGGCT CGAGGCCGAG
GCCCGCCAGC GCCGGAACGA GGCCACGCTC GACGGCCTCC TGCAGGAACG CGCGGGCGCC
GCGGCACGGC TTGCCGCCTT CGAGAGCGAC CGGCGGCAGA AGCTGCTCGA GGAGCTGGCC
GACCTCCGGC CGCGGCGCGC GGTTCTGGCC GAGCAGATCG CCGAGACCGC CGATCTCGCG
CGGCTGCACG AGCTGCGCGC GCCCGGGGCC GGGGTGGTCC TGTCGGTGGC GGCGGGCGGG
CCCGGCTCGC TGATGACGCC CGCCGATCCG GTGGCGGTGA TCGCGCCCAC CGGGGGCGGG
CTTCACGCCG AACTGGGGCT TCTGTCGCGC GATGCGGGCC TCGTGCGGGC GGGGGCGCCG
GTCCGGGTCA AGGTCGATGC CTTCCCCTGG CGCCATCACG GCGCGATCGA GGGCCGGCTG
GCCGATGTGG CGCCGAGTTC GGCCGTCCCG CCCGGCGGCG GCCCCGCCCA GCATGCGGCG
CGGGTGGTCT TTCCGCCCGG CCCTCCCCTG CCCGAGGGGC TGATGCCCGG CATGACGCTC
ACGGCCGACA TCCTCGCCGG CCGCCGCACC CTCCTGTCCT ACTTCCTCGA CCCGCTGCTC
GAGGGGCTGA GCGAAAGCCT GCGCGAGCCC CGTCCCTGA
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| Protein sequence | MRRLAPEALA YQSPLERIRH EPLPWLLRLW PFGAGALLAA LVGLAALLPI DVVVSAAGRI
AADDPAAVLR PVTAAVLRSL LVRPGDLVAP GQLLARLDSR TSDADAAQLK AQAAALSARI
ARIEAELAGR PLAGAGPDRA LEGRIQSGRA ATETALRRGL EADLARIDRG IEAARAERPA
LAETLATARE LEAMRERLMT TQNGTRAAFV ETRLARLEAE ARQRRNEATL DGLLQERAGA
AARLAAFESD RRQKLLEELA DLRPRRAVLA EQIAETADLA RLHELRAPGA GVVLSVAAGG
PGSLMTPADP VAVIAPTGGG LHAELGLLSR DAGLVRAGAP VRVKVDAFPW RHHGAIEGRL
ADVAPSSAVP PGGGPAQHAA RVVFPPGPPL PEGLMPGMTL TADILAGRRT LLSYFLDPLL
EGLSESLREP RP
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