| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3875 |
|---|
| Symbol | |
|---|
| ID | 4898460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 1006044 |
|---|
| End bp | 1007648 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640114479 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001045726 |
|---|
| Protein GI | 126464613 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.408121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTG TCGCGATCGT CGGAACCGGG CCCACGGGCA TCTATACCTT CTTCAACCTC
ATCCAGACCG ACCCCTCGCA TCACATCACC CTGTTCGAAC GGGGCGAGAA GGCGGGCATC
GGCCTCCCCT ACTCACCCGA GGCGGCCAGC AAATCCATGC TGGCCAATAT CGCAAGCATC
GAGATCCCGC CCATCGACAC CACCTATCTG GATTGGTTGA AGGGTCAGCC GGACGCGAAG
CTCCGCGCCT ACGGCCTTGA CCGGGCCGAG CTGGATGACC GCCAGTTCAC GCCGCGTCTG
CTGCTGGGAG AGTATTTCCG CGATCAGCTG CTGTCTCTGC TGGATCGTCA CCGCGCCCGC
ACCGAGGTGC TCGAGACTAC CGAGGTTACG GACGTCATTG CGCGCAACGA TGCCCTGTTC
CTGCGCGCGG CGGATCGCGA GTTCGGCCCG TTCGACCGTG TGATCCTCGC CACCGGACAT
GTGTTTCCCG ACGCGGATGA AGCGACCCGC AGCTATTTCC CCAGCCCGTG GTCCGGCCTG
ATCCAGGCGG AGGTTCCGCC GGTCTCCGTG GGCATCATGG GCACCTCGCT CAGTTCCATC
GACGCGGCGA TGGCGGTGGC AAACCAGCAC GGCCGGTTTC GACGGCACGG TGAGGAGCTG
ACGTTCGAAC CAGCGACCGA GGGCCTGCAT CTGACCCTGA TGTCCTGGTC CGGCGTGCTG
CCCGAGGCCG ATTTCTGGTG CCCGATCCCC TACGAACCCC TGCAGGTGAT GACCGACGAC
GCGGTGGCGC GGTGCGCCGC GCAGGCGGAC CCGCTGGATC GGGTCTTCGC GCTGTTGCAG
GAGGAGATCG CGCAGGCCGA CCCTGCCTAT GCCGACCGGA TCGGGCTGGC CACGCTGACC
GCCGACACCT TCGGCGATGC CTATTTCGCG GCGCGCGAGG CGCAGGATCC CTTTCGCTGG
GCCCGCAGGA ATCTGGAGGA GGTCGAACAC AACAAGGCGC ACCAGATCAC CGTCCCCTGG
CGCTATGCTC TGCTGCGGAT GCACGAAAAG GTGGAAACGC TGGTGCCGCA TCTGGGCGAT
GCGGATCGCA AGCGGTTCGA CGGCGGGCTG AAGAAGGTCT TCGTCGACAA TTACGCCGCC
GTGCCCTCCG AATCCATCCG ACGCCTTCTG GCTCTCCGGG ATGCCGGGCT GTTGTCCGTT
CTGGCGCTCG GCGAAGATTA CGAGCTGAAG CGCGAGCCCG ACCGCACGGT GATCCGCGCC
AAGGGAAAGA CGCATGTGTT TCCGGTGTTC ATCGACGCAC GAGGCCAGAA GCCGATGGAA
AGCAGGGATA TGCCCTTCCC GAGCCTGCGG CGGGCGCTGC TGGGATCGAA ACAGGACATC
CCCGAGCTGG ACGCCGACTT CGCCCTCGTC GGCGTTCCCG ACTATGACCG TCACGCGCAC
CTGGCCGCGA TCCCCTACCT GATGCACGAT CGGCCCTTCG TTCAAGGCAT TACCGCCAGC
GCAGAAATCG GCGCCACGAT TGCCCGCGGG ATCTCTCAGG CCATGGGCGA CCGTGCCGCC
CAGGGCGGTC GGAGATCTTC CGCTCCTGTC GTGGCGACCG GCTGA
|
|---|
| Protein sequence | MARVAIVGTG PTGIYTFFNL IQTDPSHHIT LFERGEKAGI GLPYSPEAAS KSMLANIASI
EIPPIDTTYL DWLKGQPDAK LRAYGLDRAE LDDRQFTPRL LLGEYFRDQL LSLLDRHRAR
TEVLETTEVT DVIARNDALF LRAADREFGP FDRVILATGH VFPDADEATR SYFPSPWSGL
IQAEVPPVSV GIMGTSLSSI DAAMAVANQH GRFRRHGEEL TFEPATEGLH LTLMSWSGVL
PEADFWCPIP YEPLQVMTDD AVARCAAQAD PLDRVFALLQ EEIAQADPAY ADRIGLATLT
ADTFGDAYFA AREAQDPFRW ARRNLEEVEH NKAHQITVPW RYALLRMHEK VETLVPHLGD
ADRKRFDGGL KKVFVDNYAA VPSESIRRLL ALRDAGLLSV LALGEDYELK REPDRTVIRA
KGKTHVFPVF IDARGQKPME SRDMPFPSLR RALLGSKQDI PELDADFALV GVPDYDRHAH
LAAIPYLMHD RPFVQGITAS AEIGATIARG ISQAMGDRAA QGGRRSSAPV VATG
|
|---|
| |