Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3769 |
Symbol | |
ID | 4898863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 891189 |
End bp | 891962 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640114374 |
Product | regulatory protein, LuxR |
Protein accession | YP_001045622 |
Protein GI | 126464509 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.997171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCGC CAGCCATGCC AGAGGTTTCC GCAGCCGCGC TGGTCGGCGC CGTGATCGAT GCGATCGGCA CGGAAGGATT CTGCCCCGCC CTGACAGCCT GGCTTCAGAC CGTCGCGCCC TATTCCTTCA CCGTGGTCTT CGGCTATCGC GGAGAGGCGA AACCCATTGA TCTCTATGAC GATTTCCCCA GCCATCGCCG CAAGGTCTTC GTGACGGACT ATCTCGAGGG GCCCTATCTG CTCGACCCCT TCTGTCAGGG GGCGATCCGT CCCGTGGAGC CGGGTTTCCA CCGGCTCAGG AGCCTCGCGC CGGACAGGTT CTATCAGGGA GAATATTTCC GGAGCTATTA CATGCGGACG GAGATCGCCG AAGAAATAGG CTGCTTTGCC GAAATGCCGG GCGATTGCCA TGTGGTCTTC TCGCTGATGC GCGAGGAGAA GCCGTTCTCT GCGCCGGAGT TCCGCAAGCT CACCGGGGTG GCGCCGATCG TGACGGCGCT GATGCGGCGG CACTGGGCGG ATCTCTCGCG GGAGTTCGCG ACGCGGTCCA CGCCCCGTCC GGCGCTGACA GGCGACGGGC TGGACCGGCT GACCCCGCGC GAGCGCGAGA TCACCGGCTG GATCCTCAAG GGCTACTCCG CCGAGGCGAC CGGCCAGGAA CTGGGCATCG CCTCCGGCAC GGTCCGGATC CACCGTCGCA ACATCTACGC GAAACTGGGC ATATCCTCGC AGCGCGAGCT CTTCGCGCGC TTTCTGGCGG GGATCTCACC GTAG
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Protein sequence | MSSPAMPEVS AAALVGAVID AIGTEGFCPA LTAWLQTVAP YSFTVVFGYR GEAKPIDLYD DFPSHRRKVF VTDYLEGPYL LDPFCQGAIR PVEPGFHRLR SLAPDRFYQG EYFRSYYMRT EIAEEIGCFA EMPGDCHVVF SLMREEKPFS APEFRKLTGV APIVTALMRR HWADLSREFA TRSTPRPALT GDGLDRLTPR EREITGWILK GYSAEATGQE LGIASGTVRI HRRNIYAKLG ISSQRELFAR FLAGISP
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