Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3756 |
Symbol | |
ID | 4898403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 876482 |
End bp | 877213 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640114361 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001045609 |
Protein GI | 126464496 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.435924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTATCG GCACACGGAC GATCGTCCCG GTGTTCCAGA CCGAGTCGGC GGGCGCCGAG CGGGCGCGCG CACCGTCGCT GACCGCTCGC GCCTACGAAG CGATCCGCCA CCGCATCCTC ACCTGCCAGA TGCCGCCCGG GCTGACCTTC ACCGAGGCCG ATCTTCTTGC CGAGATGGAG ATGAGCAAGA CGCCGATCCG CGAGGCGCTG TTGCGGCTGC AGGTCGAGGG GCTGGTCGAG ACCATTCCGC GCCGCGGCTA TGTCGTCTCG GTGCTGCATG TGGCCGACAT CGGCGAGATC TTCGACGTCC GCGCCATGGT GGAGGGCACC TGCGCCGAGG TGGCGGCCCA GCGGGCGACG CCCGAGGATC TGGAGCGGAT CGTGAGCCTG GCCCAGAGGT CGTCGGCGGC CTATGACCGG GTCGTGGACC CGGATCTGCG GCTCCTGCGG GAGCAGGCGG TGCTGAACAA CGCCTTTCAC GAGGCGATAG CCATCGCCAC CGGCAACGCG CGGCTGCACC GCATCGCCGT GCAGATCATC CGCGAATACG AGCGGTTCTT CTTCCTCGAA TGGCGGTCGG AGCTGCGCTA TTCGCCCGAC CACAAGGACC ATGCCGAGAT CGGCCGACTG ATTGCAGCGG GCGATGCCGC CGGCGCGCGC GGGGCGATGG TCGCCCATGT CGAGGGTGCG CGCGCGACCC TGCTGGCTGC GGTTGCCGGG AGCGCCCGGT AA
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Protein sequence | MIIGTRTIVP VFQTESAGAE RARAPSLTAR AYEAIRHRIL TCQMPPGLTF TEADLLAEME MSKTPIREAL LRLQVEGLVE TIPRRGYVVS VLHVADIGEI FDVRAMVEGT CAEVAAQRAT PEDLERIVSL AQRSSAAYDR VVDPDLRLLR EQAVLNNAFH EAIAIATGNA RLHRIAVQII REYERFFFLE WRSELRYSPD HKDHAEIGRL IAAGDAAGAR GAMVAHVEGA RATLLAAVAG SAR
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