Gene Rsph17029_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3164 
Symbol 
ID4898179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp187985 
End bp188998 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID640113766 
Productproline racemase 
Protein accessionYP_001045036 
Protein GI126463923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.371842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.051576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTC AGGACGTGTA TAACGTGATC TATACCCATA CGGAGGGCGA GCCGCTCTGC 
ATCATCTACA GCGGCGTCCC CTACCCGGCG GGCTCGACCA TCCTCGAGAA GCGCGCCTTC
CTCGAAGAGA ACTACGACTG GCTGCGCAAG GCGCTGATGC GCGAGCCGCG GGGCCATGCC
GACATGTTCG GCGTCTTCCT GACCCCGCCC TCGTCGCGCG ACTATGATGC GGGCCTGATC
TATATCGACG GCAAGGAATA TTCCCACATG TGCGGCCATG GCACGATCGC CGTGGCGATG
GCGATGGTGG CCAACGGGCT TGTGGCCCGC GATCCCTCGG GGCTGACCCG CATCCGCTTC
GAGACGACGG CGGGCCTCGT CGTGGCCGAG GTGGCGCACG AGGACGACCG CGTGCTCTGG
ACCCGGTTCG AGAACGTGCC GGCCTATGTG GCGGCGCAGG ACATCGCCTT CGAACTGCCG
GGCTACGGGC CGCTGAAGGC GGATCTCGTC TGGGGCGGCA ACTATTTCGG CATCATCGAC
CTGCGCGGCA CGAGCCTCCG GATCGCGCCC GAGAACGGCT CCGAGCTGTC GCGCATGGGT
CTGATCGCCC GCGAGGAGAT CCGCAAGAAG GTGACAGTCC AGCACCCGAC CGAGGCGCAT
ATCAACAATC TGAACTTCGT GACCTTCTGG CACGAGCCGA CCATCGAGGG CTGCCTCTAC
AAGAACGTCC ATGTCTTCTC GGCAGGCCAG CTCGACCGCT CGCCCGGCGG CACCGGAACC
TCGGCCATGA TGGCCTATTT CGAGGCCCGC GGCGTGATCG GGCTGAACCA GCCGATCACC
TCGGAGGGGC TTCTGGGCTC GGGCACCTTC GAGGGCTGCC TGATCGGCGA GACGACGCTC
GGCACGGTGC GCGCGGTGCG CCCCACGGTG AAGGGTACGG CCGGAATGCT CGGGACGGCC
AGCTGGACGA TCAACCGCGA GGATCCGGTG GACGCGGGCT TCCTCGTCCT CTGA
 
Protein sequence
MRVQDVYNVI YTHTEGEPLC IIYSGVPYPA GSTILEKRAF LEENYDWLRK ALMREPRGHA 
DMFGVFLTPP SSRDYDAGLI YIDGKEYSHM CGHGTIAVAM AMVANGLVAR DPSGLTRIRF
ETTAGLVVAE VAHEDDRVLW TRFENVPAYV AAQDIAFELP GYGPLKADLV WGGNYFGIID
LRGTSLRIAP ENGSELSRMG LIAREEIRKK VTVQHPTEAH INNLNFVTFW HEPTIEGCLY
KNVHVFSAGQ LDRSPGGTGT SAMMAYFEAR GVIGLNQPIT SEGLLGSGTF EGCLIGETTL
GTVRAVRPTV KGTAGMLGTA SWTINREDPV DAGFLVL