Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3064 |
Symbol | |
ID | 4898992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 77717 |
End bp | 78295 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640113666 |
Product | uncharacterized peroxidase-related enzyme |
Protein accession | YP_001044936 |
Protein GI | 126463823 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.319513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACA CGGCCGAGCT GCCCGTCAGC CGCTTTCCCG TTCCGCGCCT TTCGGATCTG CCCGACGACA TCCGCAGCCG CATCGAGGCC GTGCAGGAGA AGTCGGGCTT CGTTCCCAAC GTCTTCCTCA CGCTCGCCCA CCGCCCCGAC GAGTTCCGCG CCTTCTTCGC CTACCACGAT GCGCTGATGG ACAGGCCCGG CGGCCTGAGC AAGGCCGAAC GCGAGATGAT CGTCGTGGCC ACGTCGACCG CGAACCAGTG CCAGTACTGC GTGATCGCCC ACGGGGCGAT CCTGCGCATC CGGGCCAAGA ACCCGCTCGT GGCCGATCAG GTGGCGATCA ACTACCGCAA GGCCGACATC ACCCCGCGCC AGAAGGCCAT GCTCGATTTC GCCATGAAGG TCTCGACCCG CGCGCACGAG GTGGGAGAGA CCGATTTCGA GGCCCTGAAG CAGCAGGGAT TCGAGGAGGA GGATATCTGG GACATCGCCG CGATCTCGGC CTTCTTCGGC ATGTCGAACC GGTTGGCCAA TGTCACCAGC ATGCGTCCGA ACGCCGAATT CTACGCGATG GGGCGCTGA
|
Protein sequence | MTDTAELPVS RFPVPRLSDL PDDIRSRIEA VQEKSGFVPN VFLTLAHRPD EFRAFFAYHD ALMDRPGGLS KAEREMIVVA TSTANQCQYC VIAHGAILRI RAKNPLVADQ VAINYRKADI TPRQKAMLDF AMKVSTRAHE VGETDFEALK QQGFEEEDIW DIAAISAFFG MSNRLANVTS MRPNAEFYAM GR
|
| |