| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2995 |
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| Symbol | |
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| ID | 4899018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 2737 |
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| End bp | 4209 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640113597 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001044868 |
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| Protein GI | 126463755 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.894435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.267254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CGACGAGGCC GATCGAAGAG GCTGCCTTCG ATCTCGCCCC GATCTCGATG
TGGATCGAGG ATTTCAGCGG CGTCCGGGCC CTGTTCGACC AATGGCGCGC CGAGGGCGTG
ACCGACATCC GGGCCTTCCT CGAGGCCGAC CTGTCGCGTG TGGCCGCCTG TTCGCGGAGC
ATCAAGGTTC TCAGGGTGAA TGCCCGCACG CTCGCCCTCT ACGAGGCGCG CGATCTCGAC
CATCTGACGG AGAACCTCGA ACGGGTCTTC CGCGACGACA TGCTCCAGAG CCATGTGAAC
GAACTGTCGC AGCTCTGGGC AGGCGAGCAG ACCTTCTCCA GCCTCGCGGT CAACTACACG
CTGGGCGGGC GCAGGCTCGA CATCCAGTTG CGCGGGGCGG TGCTGCCCGG CTCCGAACAG
AGCCTCGATC GGATCCTCCT GACCTGCGAG GATGTGACCG CCCGCGAAGA GGCGCGCAGG
CTCGAACGCG CGAGCCGGCG CTACGCCGAG GGCATCTTCG AACATTCGCC GACCTCGCTC
TGGGTCGAGG ATTTCAGCCA GATCCGGCAG CTTCTCGAGA ACCTGCGCGC GCGAGGGATC
GTGGATCTGC GGGTCTTCAC CGACGTCCAC CCCGAGTTCG TCCGGCAATG CATGGGCGAG
ATCCGGGTGA TCGACGTGAA CCAGGCCACG CTCGACATGT TCTGCGCCCC CGACAAGCGC
ACGCTTCTCA GCCACCTGCG CGACATCTTC CGCGACAGCA TGGAGCCGCA TTTCCGCGAG
CAGCTGATCG AGCTCTGGAA CCATCACTAT TACCACAGCC GCGAAGTGGT GAATTACGCG
CTCGACGGCA GCGAACGGGC GGTCATCATG CATTTCGCCG TGCTGCCCGG GCACGAGCAC
GACTGGTCGC TGGTTCAGGT GGCGCTGACC GACATCACGG CCCGCAAGAA GGCCGAGGCC
TACCTCGCCT ATCTCGGCAA GCACGATGTG CTGACGGGGG TGAACAACCG GGCCTTCTAC
ATCGACGAGC TGAACCGGCT CGAGCGGCAG GGCGTGCGGC CGGTCTCCAT CGTGATGCTG
GATCTGAACG GACTGAAGGG CGTGAACGAC GCGCTCGGCC ATGACGCGGG CGACCAGCTG
CTCCGGCGGC TGGGCGAAGT GCTGAAGGAG GCGGCGGCCG AGACGAACCA TCCCGCCCGC
ATCGGCGGCG ACGAATTCGC GGTGGTCATG CCGCGGTCGA GCGAGGCCAT GGCGCAGGCG
ATGGTCGACA CGATCAAGCG GCTCCTCACG GTGAACAACC GCTTCCATTT CATGGCCCCG
CTCTCGGTCT CGATCGGCCA TGCGACGAGC CAGCCCAACG AGACGATGGA GGCCACGATC
AAGCGGGCCG ACCGGCACAT GTATGAGGAA AAGCGCAAGT TCTACGCCGA AGCCGACCGG
CGCGGGGCGC CGGCCAGCCG GACGGCAAGC TAG
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| Protein sequence | MTATTRPIEE AAFDLAPISM WIEDFSGVRA LFDQWRAEGV TDIRAFLEAD LSRVAACSRS
IKVLRVNART LALYEARDLD HLTENLERVF RDDMLQSHVN ELSQLWAGEQ TFSSLAVNYT
LGGRRLDIQL RGAVLPGSEQ SLDRILLTCE DVTAREEARR LERASRRYAE GIFEHSPTSL
WVEDFSQIRQ LLENLRARGI VDLRVFTDVH PEFVRQCMGE IRVIDVNQAT LDMFCAPDKR
TLLSHLRDIF RDSMEPHFRE QLIELWNHHY YHSREVVNYA LDGSERAVIM HFAVLPGHEH
DWSLVQVALT DITARKKAEA YLAYLGKHDV LTGVNNRAFY IDELNRLERQ GVRPVSIVML
DLNGLKGVND ALGHDAGDQL LRRLGEVLKE AAAETNHPAR IGGDEFAVVM PRSSEAMAQA
MVDTIKRLLT VNNRFHFMAP LSVSIGHATS QPNETMEATI KRADRHMYEE KRKFYAEADR
RGAPASRTAS
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