Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2938 |
Symbol | |
ID | 4895371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 3093601 |
End bp | 3094293 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640113541 |
Product | HAD family hydrolase |
Protein accession | YP_001044812 |
Protein GI | 126463698 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGG CGATCCTTTT CGACGTGGAC GGGACGCTCG CCGAGACCGA GGAGCTGCAC CGGCGCGCCT TTAACGAGAC CTTCGCCGCG CTGGGGGTGG ACTGGTTCTG GGACCGCGAG GAATACCGCG AGCTTCTGAC CACCACGGGC GGCAAGGAGC GCATCGCGCG GTTCCTGCGC CACCAGAAGG GCGATCCGGC GCCGCTGCCC ATCGCCGATA TCCACCGCGC GAAGACCGAG CGATTCGTGG CACTGATGGC CGAGGGCGAG ATCGCGCTGC GCCCGGGCAT CGCCGACCTG ATCGCCGAGG CGAAGCGCGC CGGGATCCGG CTCGCCGTGG CCACCACCAC CAGCCTGCCC AATGTCGAAG CCCTGTGCCG GGCCTGTTTC GGCCATCCCG CGCGCGAGAT CTTCGACGTG ATCGCGGCGG GCGACATGGT GGCCGAGAAG AAGCCCTCGC CGGACATCTA CCGGCTTGCG CTGCGCGAGC TCGACGTGCC GCCGGAGCGG GCCGTCGCGC TGGAGGATTC GCTCAACGGT CTCCGGGCCG CCAAGGGGGC GGGGCTGCGC TGCATCGTTT CGCCCGGCTT CTACACCCGG CACGAGGAGT TCGCGGGGGC CGACCGGCTC CTCGACAGTT TCGCCGAGCT CGGCGGGCTG GCCGGCCTCG ACCTGACGGC GCCGGTGGCC TGA
|
Protein sequence | MIEAILFDVD GTLAETEELH RRAFNETFAA LGVDWFWDRE EYRELLTTTG GKERIARFLR HQKGDPAPLP IADIHRAKTE RFVALMAEGE IALRPGIADL IAEAKRAGIR LAVATTTSLP NVEALCRACF GHPAREIFDV IAAGDMVAEK KPSPDIYRLA LRELDVPPER AVALEDSLNG LRAAKGAGLR CIVSPGFYTR HEEFAGADRL LDSFAELGGL AGLDLTAPVA
|
| |