Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1925 |
Symbol | |
ID | 4897618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2040212 |
End bp | 2041606 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640112519 |
Product | Fis family transcriptional regulator |
Protein accession | YP_001043801 |
Protein GI | 126462687 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.178133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCG GCGGGAGCCT CCCGTCCCTC GCTCCGGACC TCGTGCGCGA CCTGATCGCG ACCGCGGCCG ACATCTCGCT GCTCGTCTCG CAGGAAGGGG TGGTCCGGGA GGTGATGGCC AACCCGCACC ACCCGAGCTT CGGCCAACTC TCGGAGTGGG AGGGTCGCCC GCTCGAGGAA GTGCTGACCG CCGAGAGCGT CGCCAAGTTC CGCCTGCGCA GCGAGGGGCT TGAACCCGGC CGCGGATCGG TCGCGGTCGA GCTGAACCAC ATCGATCCGC GCAGCTTCGA GTTTCCGATC CGTTACATCC TGCACCGCCT GCCGGCCGAC CGCTCGATCC TGATGCTCGG GCGCGACCTG CGCCCCATCG CAGAGGTGCA GCAGCAGCTG GTCGCGGCGC AGCTCGCGAT GGAGCGCGAC TACGAGACCC AGCGCGAGAT GGAGACCCGC TACCGCGTGG TGCTCGACGT GTCGCGCGAT CCGATGGTGC TGGTCTCGAT GTCCACCGGG CGGATCGTCG ATCTGAACAG CGCGGCGGGG CTCTTGCTCG GCGGCGTGCG CCAGGACCTG CTGGGCGCGG CCATCGCGCA GGAGTTCGAG GGACGGCGGC GCGGCGAGTT CATGGAGACG ATGACCAATC TCGCGGCGAC CGAAAGTGCT GCGCCGGTCG AGGTGCTGGC GCGGCGGTCG CAGAAGCGGC TTCTGGTGGT GCCGCGTGTC TTCCGCGCGG CGGGCGAGCG GCTGCTCCTG TGCCAGATCG ACCCGGCCGA TGCGACGCAG CCGGTGGGCG ACGAGCTGTC CGAGAACCTC GCCCGGCTCT ATCACGAGGG GGTGGACGGA ATCGTCTTCT CCGATGCCGA CGGCACGATC CGGGGCGCCA ACGAGGCCTT CCTCAACATG ACCGACTCGT CGAGCCTTGC CGCGATCCGC GGCCGCTCGA TCGCCGATTT CCTCGCCCGC GGCAGCGTCG ACCTGCGAGT GCTGATCGAC AGTGTCAGAC GCACTGGACA ACTGCGGCTC TATGCCACCC GACTCACCAC CGACTTCGCG GGGCAGATTG CCGCAGAGAT CTCGGCCACC TGGCTCGATG ACCGCGAGCG CCCGCTGCTC GTTCTTGTCG TGCGGGACAC GAGCCGGGCC GACACGATGC GCAGGCCCGT GCCCGCGACG GGCGTGATCG ACGAGCCCGC CCGCAATGTC ATGGAGCTGG TCGGGAATTC CACACTCAAG GACATCGTGG CGGAAACCAC TGACGTTGTT GAGAAAATGT GCATCGAGAC GGCGCTGGAG CTGACGCGGA ACAACCGCGT GGCCGCGGCC GAGATGCTCT CGCTGTCGCG GCAGTCGCTT TATGTGAAGC TGCGCAAGTT CGGCCTCCTG AACAAGGACG AGTGA
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Protein sequence | MLAGGSLPSL APDLVRDLIA TAADISLLVS QEGVVREVMA NPHHPSFGQL SEWEGRPLEE VLTAESVAKF RLRSEGLEPG RGSVAVELNH IDPRSFEFPI RYILHRLPAD RSILMLGRDL RPIAEVQQQL VAAQLAMERD YETQREMETR YRVVLDVSRD PMVLVSMSTG RIVDLNSAAG LLLGGVRQDL LGAAIAQEFE GRRRGEFMET MTNLAATESA APVEVLARRS QKRLLVVPRV FRAAGERLLL CQIDPADATQ PVGDELSENL ARLYHEGVDG IVFSDADGTI RGANEAFLNM TDSSSLAAIR GRSIADFLAR GSVDLRVLID SVRRTGQLRL YATRLTTDFA GQIAAEISAT WLDDRERPLL VLVVRDTSRA DTMRRPVPAT GVIDEPARNV MELVGNSTLK DIVAETTDVV EKMCIETALE LTRNNRVAAA EMLSLSRQSL YVKLRKFGLL NKDE
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