| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1707 |
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| Symbol | |
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| ID | 4897604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1799038 |
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| End bp | 1800138 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640112300 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001043589 |
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| Protein GI | 126462475 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.839894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00283703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAGTC ACTTCTCGCC CGAGGGCGCC CGCTCCCGCC CGCTTCCCCC TCCTGCCGGC
CTCATCAATC GGGTGATCCC GGGCGAGTCG GTTTCGATCT GCCGGGTGAA GCAACTGATC
GCCGCGGTCG CCGTCAGCGA TGCGCCTGTC CTCGTGCGGG GATCGACCGG CACCGGGAAG
GAACTGGCCG CCGAGGCGCT GCACCGGGCC TCGGGCCGCG GCGGGGCGCT GATCGCGGTC
AACTGCGCCG CCATTCCGGC GGACCTGCTC GAATCCGAGC TTTTCGGCCA TGAGAAGGGC
GCCTTTACCG GCGCCGACCG GCAGCGGATC GGCCGGATCG AGATGGCCCA CGGCGGCACG
CTCTTTCTCG ATGAGATCGG GGACATGCCG CTGGCGCTGC AGGCCAAGCT GCTCCGCGTT
CTCGAAAGCC GCCGCATCTC GCGCGTGGGC GGCACCAGCG AGATCGAGGT CGATTTCCGC
CTCGTGACGG CCACGCACCG CAACCTCGAC GCGCAGGTGG CGGCGGGCGG CTTTCGCTGC
GATCTCTACT ACCGCATCAA CGTCTTTCCG CTCGAACTGC CCGACCTGCG CGAGCGCGCC
TCGGACATTC CGCTGATCCT CGCGCGGATG CTGGAGGATC AGCTGGCGCG GGACCCGGCA
CTGGATCTGC CGCATTTCGA CACCGGCGCG CTGCGGGCGC TCGCCGGGCA TTCGTGGCCG
GGCAATGTGC GCGAATTGCG CAACGTGCTT GCCCGCGCCA TCGTGCTCTT TCCGGGCCGG
ATCGTGACCG CGCGCCATGT GCGCGAGAAC CTTCTGCAGC TCGCCATGCC CGATCCCGAG
GGGCCCGCGG GCCAGCAACC GGCGGCTGCG CCAGAGGCGC AGGGACTGCC CGAACCGAGC
CAGTTCCATG ACATGCTCGA GGGGCGGGCC GACCTCGACC TGCGCGGCTA TCTGCGCGAC
ATCGAGGTGG CGCTGATCGA GGCGGCGCTG GCAAAGCGCG ATGGCTGCGT GAGCCGCGCG
GCCGATGCGC TGCGCCTGCG CCGCACGACG CTGATCGAGA AGATGAAGAA GTTCGGCATC
ATGCGGTGCA GCGCGGCGTG A
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| Protein sequence | MTSHFSPEGA RSRPLPPPAG LINRVIPGES VSICRVKQLI AAVAVSDAPV LVRGSTGTGK
ELAAEALHRA SGRGGALIAV NCAAIPADLL ESELFGHEKG AFTGADRQRI GRIEMAHGGT
LFLDEIGDMP LALQAKLLRV LESRRISRVG GTSEIEVDFR LVTATHRNLD AQVAAGGFRC
DLYYRINVFP LELPDLRERA SDIPLILARM LEDQLARDPA LDLPHFDTGA LRALAGHSWP
GNVRELRNVL ARAIVLFPGR IVTARHVREN LLQLAMPDPE GPAGQQPAAA PEAQGLPEPS
QFHDMLEGRA DLDLRGYLRD IEVALIEAAL AKRDGCVSRA ADALRLRRTT LIEKMKKFGI
MRCSAA
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