Gene Rsph17029_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1559 
Symbol 
ID4895583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1639893 
End bp1640933 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID640112149 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001043441 
Protein GI126462327 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.306197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC AGGATGCAAC TCAGCTTCTG GAGGGTGTGC CGCTGCCCCT CGTGCTGATC 
GGCCCGGATG AGCGGATCCG GGCGGCCAAC GCGCCGGCGC AGCGGCTGTT CGGCGCCGCG
AGCGTGGCGC GGCATTATGT GATGGCGATG CGGCAGCCGG CGCTGCTCGA TGCGATCGAG
GGCGCGATCC GGCTCGATCG GCCGGGGCGC GCGCGCTACA TCATCACCGG ACCCTCGCGG
GAGGTGACCT ACCGCGCCAC GGTGACCCCG GTCCGCATCC ACGGCGAGAG CTGCGCGCTC
TGCGCCTTCG AGGACATCAC CGAACAGGAG CAGATGGGCG CGATCCGGCG CGACTTCGTG
GCGAACGTGA GCCACGAGCT GCGCACCCCC CTCACGGCGC TCCTCGGCTT CATCGAGACG
CTGCAGGGCG CTGCGCGCGA CGATCCCGCG GCACGGAGCC GGTTTCTCGG CATCATGGCG
CGGGAGGCGG GCCGGATGAA TCGGCTGGTG CAGGATCTTC TGTCGCTGAG CCGGGTAGAA
TCAGAGGAGA GGGTGCGGCC GAAGACCCCG GTGGATGTGA CGGCGGTGAT CGGACAGGCC
ATCGCGGCGC TGCGCCCCAT GGCCGAGGCC GCGGGCGTCG AGATCCAGCG TCAGGGCGAG
GCGGGCCCGA TCCTGCTGCC GGGAGACCCC GACCAGCTCA CGCAGGTCTT TCACAACCTC
ATTGAGAATG CGGTGAAATA TGGCGCCTCG GGCAAGCTCG TCACCGTCGG AATCTCCCGC
GATCCCGAGG GCCTCGCGCG GCTCGGGCCC GCGGTGCGGA TCGAGGTGGT GGATCGGGGC
GAGGGGATCG ACGCCATCCA TCTGCCGCGG CTGACCGAGC GGTTCTACCG CGTGGACAAC
CACCGCTCGC GCGAGAAGGG CGGCACCGGG CTGGGCCTCG CCATCGTGAA GCATATCGTG
AACCGGCACC GCGGCCGCTT CCTCATCGAG AGCGAGCTGG GGCAGGGCAG CCGCTTCATC
GTGACGCTGC CTCTGGCCTG A
 
Protein sequence
MQAQDATQLL EGVPLPLVLI GPDERIRAAN APAQRLFGAA SVARHYVMAM RQPALLDAIE 
GAIRLDRPGR ARYIITGPSR EVTYRATVTP VRIHGESCAL CAFEDITEQE QMGAIRRDFV
ANVSHELRTP LTALLGFIET LQGAARDDPA ARSRFLGIMA REAGRMNRLV QDLLSLSRVE
SEERVRPKTP VDVTAVIGQA IAALRPMAEA AGVEIQRQGE AGPILLPGDP DQLTQVFHNL
IENAVKYGAS GKLVTVGISR DPEGLARLGP AVRIEVVDRG EGIDAIHLPR LTERFYRVDN
HRSREKGGTG LGLAIVKHIV NRHRGRFLIE SELGQGSRFI VTLPLA