Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0950 |
Symbol | |
ID | 4895242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 976991 |
End bp | 978280 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640111536 |
Product | branched chain amino acid ABC transporter periplasmic substrate-binding protein |
Protein accession | YP_001042833 |
Protein GI | 126461719 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA GTTTCACCCT GCTCGCGGCG ACGGCGCTCG CGGCCGCGAC GGCGGGCGCG GCGCAGGCGG ATCTCGTCGT GCCGAACCTC AGCTACCGCA CCGGCCCCTT CGCCGCGGGC GGCATCCCCT ATGCCGACGG CTTTCAGGAT TACTTCACGC TGCTGAACGA GCGTGACGGC GGCATCGGCG GCGAGATCGT CAAGACCCCA GAATGCGAGA CGGCCTACAA CACCGAGAAG GGCGTCGAGT GCTACGAGGC CACCAAGGGA CAGGGGGCGC TCGTCTACAA CCCGCTCTCG ACCGGCATCA CCTACCAGCT CATTCCGAAG ATGCAGGCGG ACGGGATCAC CCTCTACACG CCGGGATACG GGCGGACTTC GGCGGCCAAC GGCCGCGTTT TCGAATGGGT GTTCAACTAC CCGGCCAACT ACTGGGACGG CGCTTCGGTC GCGGTCAAGT ATCTGCTCGA CCAGAACGGC GGCAGTCTCG AGGGCAAGAA GATCGCGCTG CTCTATCACA ACTCCGCCTA CGGCAAGGAG CCGATCCGCA CGCTCGAGGA ACTGTCGAAG AAACACGGCT TCACCCTCTC GACCCTCCCC ATCGACAGCC CCGGCCAGGA GCAGAAGAGC CAGTGGCTCC AGGTCCGGCG CGAGAAGCCG GATTACGTCC TGTTCTGGGG CTGGGGCGTG ATGAACTCGG TCGCGATCCA GGAGGCCGCG AACATCCGCT TCCCGATGGA GAATTTCATC GGCATCTGGT GGTCGGGCTC CGAGAATGAC GTGGCCCCCG CGGGCGCCGG CGCGAACGGC TACAAGTCGC TGACCATGCA CGGTGTGGGG TCCGACTATC CGGTCTATGC CGACCTGAAG CAGTATGTCG TCGACGCGGG CAAGGCGGCG GGCGACGGCT CGAACGTGGG CACCGTGATC TACTCCCGCG GCATGTATGC GGCCATGGTC ATCGCCGAGG CGATCCGCAA GGCACAGGAG CTGTCCGGCA CCCCGGCCGT GAACGCGGCC CAGGTGCGTG ACGGCTTCGA GGCGCTCGAG ATCACCGAGG CGCGCATGAA GGAGCTGGGC CTGCCCGACT TCGGCCAGCC CTTCAAGGCC ACCTGCGCCG ACCATGGCGG CCCGGGCATG GCGCGCATCC AGCAATGGGA TGCGAGCGCC AAGCGCTGGA CGCTCGTCAC CGACTGGATC GCCCCCGACG ACGCGGTGCT CGACCCGCTC GTGGCCGAGG ATTCCGCGGC TTACGCCAAG GAAGCCGGCC TCTCCGAGCG CTGCAACTGA
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Protein sequence | MRKSFTLLAA TALAAATAGA AQADLVVPNL SYRTGPFAAG GIPYADGFQD YFTLLNERDG GIGGEIVKTP ECETAYNTEK GVECYEATKG QGALVYNPLS TGITYQLIPK MQADGITLYT PGYGRTSAAN GRVFEWVFNY PANYWDGASV AVKYLLDQNG GSLEGKKIAL LYHNSAYGKE PIRTLEELSK KHGFTLSTLP IDSPGQEQKS QWLQVRREKP DYVLFWGWGV MNSVAIQEAA NIRFPMENFI GIWWSGSEND VAPAGAGANG YKSLTMHGVG SDYPVYADLK QYVVDAGKAA GDGSNVGTVI YSRGMYAAMV IAEAIRKAQE LSGTPAVNAA QVRDGFEALE ITEARMKELG LPDFGQPFKA TCADHGGPGM ARIQQWDASA KRWTLVTDWI APDDAVLDPL VAEDSAAYAK EAGLSERCN
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