Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0645 |
Symbol | |
ID | 4895070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 660036 |
End bp | 661787 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640111228 |
Product | phage terminase |
Protein accession | YP_001042530 |
Protein GI | 126461416 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.709389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCT GGGCGCGGCG GGTCGTGGCT CGGAAGGAAG TCGCGGGCCC AGACGTGCGC GCCAGCTGCG CGCGGCACAT TCGGGATCTG GCGGAGGGCG GCGAGCGCGG GTTGGTCTGG GATCTCGAGG CTGCGCATCG GGCGCTCGAC TTCTTCCCGC AGGTTCTGCG GCTCTCGGAG GGCCAGTTCG ACGGCGAGCC GTTCGAGCTG CATCCCTCGC AGCAGTTCAT TGTGGGGTCG CTGTTCGGCT GGAAGCGCGC GGAGGGGACG CGGCGGTTCC GCCGGGCTTA CATCGAGCAG GGCAAGGGGA ACGGGAAGTC GCCGCTCGCG GGCGGCATCG GCCTCTATGG GATGATGGCC GATCGTGAGG CCGGGGCGCA GGTCTATGCC GCGGCGGCGA AGATGGATCA GGCGCGCATC CTGTTCGGGG ACGCGGTGTC GATGGTCCGG CAGTCTCCGC TGCTCGAGTC GCGGATCACG CCCACCGGGG TCAACCCGGT GAACAACCTT GCGGACCTTC GGACCGGGTC GTTCTTCCGC CCGCTCGGCC GGGACACGGG AAAGACCGGG TCCGGCCTGC GGCCGCACTT CGTCCTGCTC GACGAGCTCC ACGAGCATCC GTCGCGCGAC ACGCTCGAAA TGCTCGAGCG TGGTTTCAAA TTCCGCCGTC AGCCCTTGCT GCTGATGATC ACCAACTCGG GCTCCGACCG AAACTCGGTC TGCTGGGAGG AGCACGTCCA CGCGGTCGCC GTCGCTCACG GCGAGGTCGA GGACGACACC ACCTTCTCGT TCGTCTGCAG CCTCGACGAG GGCGACGATC CGCTGAACGA TCCATCGTGC TGGAAGAAGG CCAATCCGCT CCTCGGGGTC ACGCTGTCGG AGGCCTACCT TGCGGATGTG GCCGCGCAGG CCCGCGCCAT TCCCGGCAAG GCGAACGGGA TCTTGCGCTT GCACTTCTGC GTCTGGACGG ATGCCGAGGC CGCGTGGATC GCGCGCGAGA CATGGGAGGC TTGCGAGGAC GCCAGCCTTC GGCTCGACGA CTTCGAGGGC GAGGATGCGT GGGTCGGTCT TGATCTCGGG GCCACCAAGG ACTTGACGTG GCGGGCGCTG GTGTTCCGCG ACGGGATGAC CGAGGAGCGG GTCGACGAGG CCACCGGTCA GGTGATCCCG CCACAGCAGA AGTTCGTGCT GTTCGGGCAG GGCTTCACTC CGGGCGCCAC GCTGAAGGAG CGGGCGAAGC GGGACAAGGC GCCCTACGAG CTCTGGGTGA AGGGCGGGCA TCTGACCGCC ACGCCGGGCA AGGTCATCCG CCTGGATTAC GTCGCGGCCG ATCTGGTCGA CCTGTCGCAG CGGTTCTCGC TGGTGGCCGT CGCCTATGAC CGCTGGCTGA TCCGCAAGCT GGACGAGGAG CTCGACGAAA TGGGCGCGGT CCTGCCGGTG GTGGAGCATC CGCAGGGCAC GAACCGGCGG CAGAACAGTC CGCTCTGGAT GCCTGAAAGC ATCGACACCT TCGAGACGCT GCTGATCGAG AAGCGGATCC GGATCGCGAT CAATCCGGCG CTGCGCTCGG CCGTGGCCTC GGCGGTGTTC TGGACGTCGC CTGCAGGTCT GCGCCGGTTC GAGAAGAACC GGAGCACCTC GCGGATCGAC GGTGCGGTCG CCTCGGCAAT GGCGATCGGC GCGGCCACCG CGCAGCTGGT GGAGGAAGGT GTCGACATGG ACGATGTGCT CGCGAACGTG GTGGCGGTCT GA
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Protein sequence | MTAWARRVVA RKEVAGPDVR ASCARHIRDL AEGGERGLVW DLEAAHRALD FFPQVLRLSE GQFDGEPFEL HPSQQFIVGS LFGWKRAEGT RRFRRAYIEQ GKGNGKSPLA GGIGLYGMMA DREAGAQVYA AAAKMDQARI LFGDAVSMVR QSPLLESRIT PTGVNPVNNL ADLRTGSFFR PLGRDTGKTG SGLRPHFVLL DELHEHPSRD TLEMLERGFK FRRQPLLLMI TNSGSDRNSV CWEEHVHAVA VAHGEVEDDT TFSFVCSLDE GDDPLNDPSC WKKANPLLGV TLSEAYLADV AAQARAIPGK ANGILRLHFC VWTDAEAAWI ARETWEACED ASLRLDDFEG EDAWVGLDLG ATKDLTWRAL VFRDGMTEER VDEATGQVIP PQQKFVLFGQ GFTPGATLKE RAKRDKAPYE LWVKGGHLTA TPGKVIRLDY VAADLVDLSQ RFSLVAVAYD RWLIRKLDEE LDEMGAVLPV VEHPQGTNRR QNSPLWMPES IDTFETLLIE KRIRIAINPA LRSAVASAVF WTSPAGLRRF EKNRSTSRID GAVASAMAIG AATAQLVEEG VDMDDVLANV VAV
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