Gene Rsph17025_4377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4377 
Symbol 
ID5086559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009432 
Strand
Start bp22087 
End bp22416 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID640485933 
Producttype IV secretory pathway, VirB3 family protein 
Protein accessionYP_001170527 
Protein GI146280372 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3702] Type IV secretory pathway, VirB3 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones118 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones186 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGG TCAAGCTGAA CGAGGATCCG CTGTTCCTGG CGCTCACGCG CCCGGCGATG 
ATCTTCGGCA TCCCGATGGA AGCCTTCGCC CTGTCGTGCG GCGCCGCCGG CCTCGCGATG
ATCTCGGCCG ACTCCATCCT CTACCTTCTC CTCGCCGTCC CCCTCCTGGT CGCGTCGCGG
ATCATCGTCG AGCGCGATCA GAACGCCTTC CAGATCCTGT TCCGGTGGCT CGACACCTCG
GCGCGCTGCC GGAACCGCGC CTTCTGGGGT GGTACCACCT GCTCGCCGCT GCGCCTCCGC
CGGTCGTTCA AGGTCGAGGA GATCGACTGA
 
Protein sequence
MEKVKLNEDP LFLALTRPAM IFGIPMEAFA LSCGAAGLAM ISADSILYLL LAVPLLVASR 
IIVERDQNAF QILFRWLDTS ARCRNRAFWG GTTCSPLRLR RSFKVEEID