| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4376 |
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| Symbol | |
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| ID | 5086558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009432 |
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| Strand | - |
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| Start bp | 19730 |
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| End bp | 22087 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640485932 |
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| Product | type IV secretion/conjugal transfer ATPase |
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| Protein accession | YP_001170526 |
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| Protein GI | 146280371 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 174 |
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| Fosmid unclonability p-value | 0.851787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTCG GAAAGAAGAT CGCCACCGAA CTTGTCGCCG ACCGCTACCT GCCGTTCATC
CGGCATTCGG ACGAGCACAC GATCATCACC CGCAGCCGCG GCGCCTTCCA GATGCTCAAA
CTGGACGGCG TCTCATTCCG CACCGCGGAC ACGAGCGCGG TCAACACGTT CCACAACGGC
CTCAACCACG CGATCCGCAA CATCGCGGCC GACAACTTGA TGGTCTATGT CCACGTCATC
CACACGCCCG ACGCCGAATA TCCGGCGGGC AGCTTCCAGT CGGCCACGGC GGGCTGGATC
GACGAAAGCT ACAGGGGCAG GCTGGAAACC CGGCGGCTGT TCCGCAACGA CCTCTACCTC
ACGATCTACA TGCAGCCGCG GGTCGCCCCC GGCATGAGCC TCGCCCGCGG CGTCCGTCGC
GCCCGCACCA GCGAGGTCGA GGTTGACCGG GATCTCCTGA CCGAACTGGA CGACAAGGCG
AACCAGCTCC AGCGGACGCT GGCCCGGTTC AACCCGCGCA AGCTCTCGAT CATCCGGAAC
GAGCGCGGCC TGCTGATCTC GGAGCCCGCC AGCGTGCTCA GGCAAATCAT CACCGGCCGG
CACGAGCCGG TGCCGGTGGT CCACGGCACG ATCGGCTCCG CCATCCATAC CGACCGCGTC
ATCTTCGGAC GCGAGGCGCT GGAGATCCGC CACTCCGACG CGAGCACCTA CGGCGCCATC
TTCGCGGTGA AGGAATACCA CGCGCTCACC CGCCCGAACA TGTTCGACGA CTTGCTGACG
GCGCCCTTCA GCTTCGTGCT GACGCAGTCG TTCCGCTGCG TGGCCAAGAA CATGGCCCTC
CGGCAGATGG CGCTGAAGGA GGGCCGGATG CGGAACGCGG GCGATCCGGC GCTGTCGCAG
GCCGACCAGC TGATCGCCGC GCGGGACGAG CTGATGTCCG GCAAGTTCGT GATGGGTGAG
CACAACCTCA CGCTTCTGGT TCTCTGCGAG ACCCCGGCCG AGCTGAAGAA CCGCGTGGCG
GATGCCCGGA ACCTGCTGGC GGACTCGGGC GCCGTCGTCG CGCGCGAGGA CATGGGGCTG
GAAAGCCAGT TCTGGTCGCA GCTGCCCGGC AACCACGCCT TCCGCGCCCG CGTCGCGCTC
ATGACCAGCC GCAATTTCAC GGCGATGGCA CCGCTCCACA ACTATCCGAC CGGGCACCGC
CACGGGAACG AGTGGGGCGA CGCGATCTGC AAGCTGCAGA CGAGCGCCGG CAGCCCCTTC
TACTTCAACT TCCATGTAGG CGACCTCGGC CACACCTTCA TCGCCGGCCC GTCAGGGTCG
GGCAAGACAG TGCTGCAGAC CTTCCTGCTG TCGCAGCTGG AGAAGTTCGG GGCGAAGCGG
ATCCTGTTCG ACAAGGACCG GGGCGCCGAG ATCTTCGTGC GCGCCTCCGG CGGCTCCTAT
CTCGACTTCC GCAACGGCGT GGCGACCGGC TGCGCGCCGT TCATGGCGCT GGACATGACG
CCCGACACGC AGGCGTTCAT GGTCGAACTG GTGAAGTCGA TGCTCGGCGG CGACCGGGCA
GGCTTCAGCG CCGATGACCA GCACCGGATC GAGGCGGCCG TCCAGCACCT GGGCGCCCTG
CCGGTCGAGC AGCGGACGGT GCGCGCCCTT TGCGATCTGC TGGGCTTCGG GGGAGGGGCC
GAGGACATCG GCAGCCGCCT CGACCGCTGG ACGAAATCCG GCCGCCTCGG CTGGGTCTTC
GACAATGCGG CGGACGAGAT CGACTTCAAC GCCGATCTCG TCGGCTTCGA CATCACCGAG
TTCCTCGACG ATGCCGAGAT CCGCAACCCG ATCATGATGT ACCTGATGCG CCGAATCGAG
CAGCTGATCG ACGGCCGCCG CATCGCCATC TTCATTGACG AGTTCTGGAA GGCGCTGACC
GACCCCTATT TCAGCGACTT CATCAAGAAC AAGCTGAAGG TGATCCGGAA GCAGAACGGG
ATCATCGTCG CGGGCACGCA GTCGGCCTCG GACGTGATCG CAAGCCCGAT CGCGCGGACG
ATCATCGAGC AATGCGCGAG CCAGATCTGG TTCGGGTCGG ACCGCGCCAG CGCCTCGGAC
CTGGTCGAGC ATTTCGGCCT CTCGCACCGC GAGTACGAGA TCGTGCGCGA GGAGCTGCCC
CGGGGCCACT TCCTGGTCAA GCAGGGCGGC AACTCGATCG TCTGCGACCT CGACCTGACC
GGGCTCGAGG ACGTGCTGAC GGTGCTGTCG GGCCGAACAT CCACCAATGC CATCCTCACG
GAGCTTCGCC AGATCCATCC GGATCCCGTG GACTGGCTGC CCCGGCTGTT CCAGCGCAGA
AAGGAGACGA CCTCATGA
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| Protein sequence | MGFGKKIATE LVADRYLPFI RHSDEHTIIT RSRGAFQMLK LDGVSFRTAD TSAVNTFHNG
LNHAIRNIAA DNLMVYVHVI HTPDAEYPAG SFQSATAGWI DESYRGRLET RRLFRNDLYL
TIYMQPRVAP GMSLARGVRR ARTSEVEVDR DLLTELDDKA NQLQRTLARF NPRKLSIIRN
ERGLLISEPA SVLRQIITGR HEPVPVVHGT IGSAIHTDRV IFGREALEIR HSDASTYGAI
FAVKEYHALT RPNMFDDLLT APFSFVLTQS FRCVAKNMAL RQMALKEGRM RNAGDPALSQ
ADQLIAARDE LMSGKFVMGE HNLTLLVLCE TPAELKNRVA DARNLLADSG AVVAREDMGL
ESQFWSQLPG NHAFRARVAL MTSRNFTAMA PLHNYPTGHR HGNEWGDAIC KLQTSAGSPF
YFNFHVGDLG HTFIAGPSGS GKTVLQTFLL SQLEKFGAKR ILFDKDRGAE IFVRASGGSY
LDFRNGVATG CAPFMALDMT PDTQAFMVEL VKSMLGGDRA GFSADDQHRI EAAVQHLGAL
PVEQRTVRAL CDLLGFGGGA EDIGSRLDRW TKSGRLGWVF DNAADEIDFN ADLVGFDITE
FLDDAEIRNP IMMYLMRRIE QLIDGRRIAI FIDEFWKALT DPYFSDFIKN KLKVIRKQNG
IIVAGTQSAS DVIASPIART IIEQCASQIW FGSDRASASD LVEHFGLSHR EYEIVREELP
RGHFLVKQGG NSIVCDLDLT GLEDVLTVLS GRTSTNAILT ELRQIHPDPV DWLPRLFQRR
KETTS
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