Gene Rsph17025_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4179 
Symbol 
ID5086351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp227457 
End bp228155 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content63% 
IMG OID640485741 
Producthypothetical protein 
Protein accessionYP_001170335 
Protein GI146280178 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.365276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA GAAAGATCGC GCTGGCGGAG AATCAGGGAC TCGTCCGGGA AGTGCTCGCC 
GCCTATCTCG CCAGCCAGCT CGATGCAGAG ATCATCGAAG CCGGGAGCAC CCATGAACTC
GAGGGGCACC TCGAGCGGAA TGGGTCGGTG GACCTGATTC TTCTCGATCT GCTCCTGCCG
GGCATGAAGC CGGGGCTTGA GGCGCTGTCC CGTCTCCTCG AGTTGAACCA GGGCCAGCCG
ATCGTGCTCT TCGCCAGCAA CGCCGGGCCC AGTGTCGTGA TCGAAGCTCT CGAAAAGGGT
GCAGCCGGCT ACATCGACAA GACCCAGGGC GCCCGCTCGA TGGTCAATGC CCTGAACTTC
ATCCTGGCGG GAGAGACGTA CCTTCCGGCC TTCATGCGAC TGACGCCGCG GCGGCACTCA
TCTGACGAAC GCGGGCTCAC TCCCAAGGAA CTCGAAGTCC TGGGCGGGCT GACAATCGGC
CTGATGAACA AGGAAATCGC TCAGAACATG GGCTTGAGCG AGGTGACGGT GAAGATGCAT
GTCCGCTCCA TCTGTGCCAA GCTGAATGTG AAAAACCGCA CACAGGCGGC GATGGTGGCC
GCGCAGTTCG GCTATCAGGA GCCTCAGGCC GCCAGGCCGG GACGGCTGGA GGTCGCCGCC
CCCCGGCCTG CCGAGAACCC GATCGATCTC GCCAGCTGA
 
Protein sequence
MQKRKIALAE NQGLVREVLA AYLASQLDAE IIEAGSTHEL EGHLERNGSV DLILLDLLLP 
GMKPGLEALS RLLELNQGQP IVLFASNAGP SVVIEALEKG AAGYIDKTQG ARSMVNALNF
ILAGETYLPA FMRLTPRRHS SDERGLTPKE LEVLGGLTIG LMNKEIAQNM GLSEVTVKMH
VRSICAKLNV KNRTQAAMVA AQFGYQEPQA ARPGRLEVAA PRPAENPIDL AS