Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4045 |
Symbol | |
ID | 5086218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 81345 |
End bp | 82514 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485608 |
Product | hypothetical protein |
Protein accession | YP_001170202 |
Protein GI | 146280045 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0317207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.284083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA CCCCCGACAT CGACTGCCTG GTGATCGGCG GCGGCTTCTA CGGCTGCTGC CTGGCGCTCT TCCTGCGCTC GGTCACCGAT CGGATCGTGC TGGTCGAGGC GGGCGACCGG CTGATGGACC GCGCCTCGCG GGTCAACCAG GCGCGGGTCC ACACCGGCTT CCACTATCCG CGCTCGGCCC TGACGGCGGC CAAGTCGATG GTGCTGCACC GCCGCTTCGC CGAGGATTTT CCCGAGGCGG TGCGGTCCGA CTTCCAGATG CTCTATGCGA TCGCGCGGCG CCGCTCGAAG GTCAGCGCCA AGCGGTTCCA CCGGATGTTC GCCGACATGG GCGCGCCCAT CGCCCCCGCC ACCCGGTCGC AGGCGGCCCT GTTCGATCCG GCCACCATCG AGGCGGCCTT CGCCTGCACC GAGATGGCCT TCGACCATTC CGTGCTGGCC CGGCGTCTGG GGGGGCAGCT CGACGCGCTG GGGCTGGACG TGCGGCTCTC CACCGCCGCC GTGCAGCTCG AGGAGCAGGC CGAGGGCGTG GTCGTGCGGC TCTCCTCGGG GGCGGAGCTG TTCGCCCGGC ATGTCTTCAA CGTGACCTAC GCCCAGATCA ACAGCCTCCT GCGTCCGGCC GGCCTGCCCG AGGCCAGCCT GAAGCATGAG CTGACGGAGA TCGCCCTCGT GCGGCCCCCG GCCCAGCTCG AGCGGTTCGG GATCACGGTG ATGGACGGGC CCTTCTTCTC GGTGATGCCC TATCCCTCCG AGGGGCTGCA TTCGCTGACC CATGTCCGCT ACACGCCGCA GCTGAGCTGG ACCGACGGGA CGAGCGGCCG CTCGGCCTAC GAGACCTTCG CCGCCGCCGA GCCGCAGAGC CGGCACCGCC ACATGATCCT CGACGGGCAG CGCTACCTGC CTTGCCTGGC CGAAAGCAGC TGGGTGAAGT CGATCTTCGA CGTGAAGACG GTGCTGGTGA AGAACGAGCA GGACGACGGG CGGCCGATCC TCTACCAGCA GCAGCCCGCG GGCTCGCGGG TGATCTCGAT CCTCGGCGGC AAGATCGACA ACATCTACGA CCTCTTCGAC CTCGTGCGGC TGACCCGGCC GGACTGGGCC GGCGCGACCG AGGCCTTCGT CGGCCCGCCC GCGCCCCGCG GCACGCGGGG GGTGGCGTGA
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Protein sequence | MSRTPDIDCL VIGGGFYGCC LALFLRSVTD RIVLVEAGDR LMDRASRVNQ ARVHTGFHYP RSALTAAKSM VLHRRFAEDF PEAVRSDFQM LYAIARRRSK VSAKRFHRMF ADMGAPIAPA TRSQAALFDP ATIEAAFACT EMAFDHSVLA RRLGGQLDAL GLDVRLSTAA VQLEEQAEGV VVRLSSGAEL FARHVFNVTY AQINSLLRPA GLPEASLKHE LTEIALVRPP AQLERFGITV MDGPFFSVMP YPSEGLHSLT HVRYTPQLSW TDGTSGRSAY ETFAAAEPQS RHRHMILDGQ RYLPCLAESS WVKSIFDVKT VLVKNEQDDG RPILYQQQPA GSRVISILGG KIDNIYDLFD LVRLTRPDWA GATEAFVGPP APRGTRGVA
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