Gene Rsph17025_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4045 
Symbol 
ID5086218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp81345 
End bp82514 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID640485608 
Producthypothetical protein 
Protein accessionYP_001170202 
Protein GI146280045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0317207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.284083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CCCCCGACAT CGACTGCCTG GTGATCGGCG GCGGCTTCTA CGGCTGCTGC 
CTGGCGCTCT TCCTGCGCTC GGTCACCGAT CGGATCGTGC TGGTCGAGGC GGGCGACCGG
CTGATGGACC GCGCCTCGCG GGTCAACCAG GCGCGGGTCC ACACCGGCTT CCACTATCCG
CGCTCGGCCC TGACGGCGGC CAAGTCGATG GTGCTGCACC GCCGCTTCGC CGAGGATTTT
CCCGAGGCGG TGCGGTCCGA CTTCCAGATG CTCTATGCGA TCGCGCGGCG CCGCTCGAAG
GTCAGCGCCA AGCGGTTCCA CCGGATGTTC GCCGACATGG GCGCGCCCAT CGCCCCCGCC
ACCCGGTCGC AGGCGGCCCT GTTCGATCCG GCCACCATCG AGGCGGCCTT CGCCTGCACC
GAGATGGCCT TCGACCATTC CGTGCTGGCC CGGCGTCTGG GGGGGCAGCT CGACGCGCTG
GGGCTGGACG TGCGGCTCTC CACCGCCGCC GTGCAGCTCG AGGAGCAGGC CGAGGGCGTG
GTCGTGCGGC TCTCCTCGGG GGCGGAGCTG TTCGCCCGGC ATGTCTTCAA CGTGACCTAC
GCCCAGATCA ACAGCCTCCT GCGTCCGGCC GGCCTGCCCG AGGCCAGCCT GAAGCATGAG
CTGACGGAGA TCGCCCTCGT GCGGCCCCCG GCCCAGCTCG AGCGGTTCGG GATCACGGTG
ATGGACGGGC CCTTCTTCTC GGTGATGCCC TATCCCTCCG AGGGGCTGCA TTCGCTGACC
CATGTCCGCT ACACGCCGCA GCTGAGCTGG ACCGACGGGA CGAGCGGCCG CTCGGCCTAC
GAGACCTTCG CCGCCGCCGA GCCGCAGAGC CGGCACCGCC ACATGATCCT CGACGGGCAG
CGCTACCTGC CTTGCCTGGC CGAAAGCAGC TGGGTGAAGT CGATCTTCGA CGTGAAGACG
GTGCTGGTGA AGAACGAGCA GGACGACGGG CGGCCGATCC TCTACCAGCA GCAGCCCGCG
GGCTCGCGGG TGATCTCGAT CCTCGGCGGC AAGATCGACA ACATCTACGA CCTCTTCGAC
CTCGTGCGGC TGACCCGGCC GGACTGGGCC GGCGCGACCG AGGCCTTCGT CGGCCCGCCC
GCGCCCCGCG GCACGCGGGG GGTGGCGTGA
 
Protein sequence
MSRTPDIDCL VIGGGFYGCC LALFLRSVTD RIVLVEAGDR LMDRASRVNQ ARVHTGFHYP 
RSALTAAKSM VLHRRFAEDF PEAVRSDFQM LYAIARRRSK VSAKRFHRMF ADMGAPIAPA
TRSQAALFDP ATIEAAFACT EMAFDHSVLA RRLGGQLDAL GLDVRLSTAA VQLEEQAEGV
VVRLSSGAEL FARHVFNVTY AQINSLLRPA GLPEASLKHE LTEIALVRPP AQLERFGITV
MDGPFFSVMP YPSEGLHSLT HVRYTPQLSW TDGTSGRSAY ETFAAAEPQS RHRHMILDGQ
RYLPCLAESS WVKSIFDVKT VLVKNEQDDG RPILYQQQPA GSRVISILGG KIDNIYDLFD
LVRLTRPDWA GATEAFVGPP APRGTRGVA