Gene Rsph17025_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3952 
SymbolhisZ 
ID5086127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp858298 
End bp859380 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content73% 
IMG OID640485510 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_001170111 
Protein GI146279953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0242262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGG AAGCCGAGGC GCTCTTTGCG GCCTTTCAGG CGGCGGGGGC GGTGCCGGTC 
GAGGCCGACA TCCTGCTGCC CGCGGGCACG CTCCTCGACC TCTATGGCGA GGATATCCGG
GCACGGGCCT ATGTCACCTC GGACCCGCTG CGCGGCGAGA TGATGCTGCG CCCCGACTTC
ACCGTGCCGG TGGTGCAGGC GCACATGGGC GAAGGGGCCG AACCCGCGCG CTACACCTAC
ATGGGCGAGG TCTTCCGTCG CCAGGAACAT GTCGGCCCGC GCGCGTCGGA ATACATGCAG
GTGGGCTTCG AGCTGTTCGA CCGGGCCGAA CCCGAGGCCG CCGATGCCGA GGTCTTCGCG
CTGATTGCCG AGCTGCTGGC GCCGCTGGAC CTGCGGGCCG CGACGGGCGA CATCGGCATC
CTGATGGCGG CAGTGCGCGG TCTTTCGACC ACCGAGAAGC GCAAGGCGGC CCTCCTGCGT
CATGTCTGGC GGCCCAACCG GTTCCGCGCG CTGCTCGACC GCTTTGCAGG CCGCACTCCG
GTGCCCGAGG CGCGGCTGCG CCTTCTGGAC CGGCTGTCGG GGGCGGGCGC GGTCGAGCTG
ATGGAGGCCG CGGGTCCGGC GATCGGCCTG CGCGAGCCGG ACGAGATCGA GGCCCGGGCC
GCCGCGCTGG TCGAGGATGC CTCGGCCGCA CCGCTGGGGG CCGAGGAGAC GGCGGTGCTT
GACGACCTCC TGTCGCTCGA GGATGCGGCG CCGGCCGCGC TGGACCGGCT GGAGGGGCTT
GCGCGCCGGA TGCCGTCGCT GGGGCCGTCG GTCGCCCGCT TCGCGCGCCG TCTGGGCGCC
CTCTCGGCCC GCGGGATCGC GGTGGAGCAC CTGCCCTTCG ACGCGAGCCA CGGCCAGAGT
TCGCTCGAAT ATTACGATGG CTTCGTCTTC AGCTTCCACG CCGCCGATCC GGCACTGCCG
CCGGTTTCGA CCGGCGGACG GTATGATGCG CTGACGGCGG TGCTGGGGCA GGGCCGATCC
ATCCCCGCCG TGGGTGGCGT GATCCGTCCG GGCCTCGTGG CCAGGCTGAA GGGGCTCGCA
TGA
 
Protein sequence
MRAEAEALFA AFQAAGAVPV EADILLPAGT LLDLYGEDIR ARAYVTSDPL RGEMMLRPDF 
TVPVVQAHMG EGAEPARYTY MGEVFRRQEH VGPRASEYMQ VGFELFDRAE PEAADAEVFA
LIAELLAPLD LRAATGDIGI LMAAVRGLST TEKRKAALLR HVWRPNRFRA LLDRFAGRTP
VPEARLRLLD RLSGAGAVEL MEAAGPAIGL REPDEIEARA AALVEDASAA PLGAEETAVL
DDLLSLEDAA PAALDRLEGL ARRMPSLGPS VARFARRLGA LSARGIAVEH LPFDASHGQS
SLEYYDGFVF SFHAADPALP PVSTGGRYDA LTAVLGQGRS IPAVGGVIRP GLVARLKGLA