Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3948 |
Symbol | |
ID | 5086123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 851361 |
End bp | 852818 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640485506 |
Product | hypothetical protein |
Protein accession | YP_001170107 |
Protein GI | 146279949 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.804932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.121566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA TCGCGTTCAT CCTGAACGGA ACGCCCCTCA GCGTCTCGGC CGAGCCCACG CGGACGCTCC TCGACTTCCT GCGCGAAGAC CGCGGCCTCA CCGGCACGAA GGAGGGCTGC AACGAAGGCG ACTGCGGCGC CTGCACCGTC ATGGTGGCTG ATGAGACCGG CCCGCGCGCC CTGAACGCCT GTCTGCTCTT CCTGCCGCAA CTGCAGGGCA AGGAGGTCCG CACCGTCGAG GGCCTCGCCG CGCCCGACGG CCGCCTGCAT CCCGTCCAGC GGGCGATGAT CGACGAACAC AGCTCGCAAT GCGGCTTCTG CACGCCCGGC ATCGTCATGT CGCTCGCCGT GGCGCACGCA ACCGGCTGTC GCGACCATGA CGACACGCTC GCGGGCAACC TCTGCCGCTG CACAGGCTAC GCCCCCATCA TCCGCGCCGC CCAAGCCGCC GAGACAGAAC CGCAGCCCCA CTGGCTGCCG TCCTTCACTC TGCCTCAAAT ATCCTCGGGG GGGACCGTGA GCGGCGGGAG CCCCTCCCCG GGAGGGGCAG CCGCGAACGC CCGCCCGGCG GGCGGGCACG GGGGGGCAGA CAGCCCCCCC GCCGCCGCCA GCCGCCCGAC GAGCGTCGCG GAGCTTGCGC GTCTCTACGA GGCCCATCCC GAGGCCACGC TGATCGCGGG CGCCACCGAC GTAGGGCTCT GGGTCACGAA AGAGCTGCGC GACCTGCCGA CGCCGATCTT CCTTGGCGCC ATCCCGGAGC TCCGCCGCAT CGACGAGGAG GACGGACAGC TCCGCGTCGG CGCCATGGTC ACCATCGCCG AACTGCGCGC GGCGCTGGCA CCCCGCCTGC CCGCCTTCGC CGAACTCCTG CGCCGTTTCG CGAGCGTGCA GATCCGCAAC GCCGCCACGA TCGGCGGCAA CATCGCCAAC GGCTCGCCCA TCGGCGACAC GCCGCCCGCC CTGATCGCGC TCGGCGCCAC GCTGCACCTG CGTCGGGGAG AGGAGCGGCG CTCGCTGCCG ATCGAGGACT TCTTCCTCGA CTACCGCAAG CAGGACCGGC GTCCGGGCGA GTTCGTCGAG GCGGTCACGA TCCCCACCGA GGCCCCGGCG CTGCGCTGCT ACAAGCTGTC GAAACGGTTC GATCAGGACA TTTCGGCGGT CTGCGGCTGC TTCAACATCG AGCTGGACGA GGGCCATGTC GTGTCGGCCC GCGTGGCTTT CGGCGGCATG GCGGGGATCC CGAAGCGGGC GTCGGCGGTC GAGGCCGCTC TCATCGGCCG GCCCTGGACG CTCGCCACGG CTGAGGCCGC CCGGCCGGCC TTCGCCGAGG ATTTCACCCC GCTTTCGGAC ATGCGCGCCT CGGCCGCCTA CCGGCTGGAG GCGGCGGCCA ACATGCTGAC CCGCGCCTTC CACGATCTCG ACGGCGGCAG GGTCTCGGTG CTGGAGGTGG GCGCATGA
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Protein sequence | MTDIAFILNG TPLSVSAEPT RTLLDFLRED RGLTGTKEGC NEGDCGACTV MVADETGPRA LNACLLFLPQ LQGKEVRTVE GLAAPDGRLH PVQRAMIDEH SSQCGFCTPG IVMSLAVAHA TGCRDHDDTL AGNLCRCTGY APIIRAAQAA ETEPQPHWLP SFTLPQISSG GTVSGGSPSP GGAAANARPA GGHGGADSPP AAASRPTSVA ELARLYEAHP EATLIAGATD VGLWVTKELR DLPTPIFLGA IPELRRIDEE DGQLRVGAMV TIAELRAALA PRLPAFAELL RRFASVQIRN AATIGGNIAN GSPIGDTPPA LIALGATLHL RRGEERRSLP IEDFFLDYRK QDRRPGEFVE AVTIPTEAPA LRCYKLSKRF DQDISAVCGC FNIELDEGHV VSARVAFGGM AGIPKRASAV EAALIGRPWT LATAEAARPA FAEDFTPLSD MRASAAYRLE AAANMLTRAF HDLDGGRVSV LEVGA
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