Gene Rsph17025_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3713 
Symbol 
ID5085579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp613176 
End bp613622 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content72% 
IMG OID640485276 
Producthypothetical protein 
Protein accessionYP_001169885 
Protein GI146279727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID[TIGR02219] putative phage cell wall peptidase, NlpC/P60 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGA CAGTCCCAAC GGTCGATCCC GCGCGCGTCG TCGCGGTCGC GCGGTCGTGG 
TTGGGTACGC CCTATCACGA CCAGGCCAGT TTGCGCGGGG TCGGCTGCGA CTGCCTCGGC
CTCGCGCGCG GTGTCTGGCG CGAAGTGGTC GGGCCGGAGC CGTTCCCGAT CCCGCCCTAC
AGCCGGGATT GGGGCGAGAC CGGGCCGCGC GAGGTGCTGG CAGACGGGGC GCGGGCGATG
ATGCCCGAGA TCGCACCGGC CGACGCCCCA CCCGGCGCGC TGGTCCTGTT CCGCATGGTG
CCGCGCGCCA TCGCAAAGCA TGTGGGCATT CTCACCGGCC CGGACACCTT CCTCCACTCC
TGTGAACGCC TCGGCGTGAT CGAGGAACCG CTGTCCACCT CCTGGCGGCG GCGCATCGCC
TTCACCTTCC TCTTCCCCGC GCGCTGA
 
Protein sequence
MTATVPTVDP ARVVAVARSW LGTPYHDQAS LRGVGCDCLG LARGVWREVV GPEPFPIPPY 
SRDWGETGPR EVLADGARAM MPEIAPADAP PGALVLFRMV PRAIAKHVGI LTGPDTFLHS
CERLGVIEEP LSTSWRRRIA FTFLFPAR