Gene Rsph17025_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3679 
Symbol 
ID5085539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand- 
Start bp572696 
End bp573304 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID640485237 
Producthypothetical protein 
Protein accessionYP_001169852 
Protein GI146279694 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.668184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA GGACGCAGCC GGAACGAGAG GTCGGGATGC AGGATCAGAC GCTGGTGGCA 
CCGCCACCCG AGGCCGAGGC GCCGCCCCTT CCGGGCGACC TGATGATGTG GATCCTCATC 
GTCTCCGAGC TGCTCGTCTT CGGCGCGGGG CTTGCGGCCA TGATGGCGGT CCGACTGAGC 
GATCCGGCCG GCTTCGCCGC GGCGCAGGAC CTTCTTCACC GTGGCGCGGC GGGGTTGAAC 
ACGCTGGTTC TGGTCACCTC GGGTCTGCTT GCGGCCCTGG CCACGCGGGC TGCGTTCGAG 
GGCCGTGTCG CACGGGTCCG CCTGCTGCTG GCCGGCGCGG CCGCTCTGGG GCTGGTGTTC 
CTGATCGTCA AGGGATCGGA GTTCCGCGAT CTGGCCTCTG CCGGCATCTC GACCGAGAGC 
CATGCCTTCT TCACCTTCTA TTATCTTCTG ACCGGCTTTC ACGCCGCCCA TGTGGCGGCC 
GGGATCCTGC TCTTTGCCGT CGTGGGCTGG CGGTGCTGGC CTGCCGGTGT CGAGATGGCG 
GCCGCCTTCT GGCACATGGT GGATCTGGTC TGGGTCCTGA TCCTGCCCGT CGTCTATCTG 
CTGAGCTGA
 
Protein sequence
MAGRTQPERE VGMQDQTLVA PPPEAEAPPL PGDLMMWILI VSELLVFGAG LAAMMAVRLS 
DPAGFAAAQD LLHRGAAGLN TLVLVTSGLL AALATRAAFE GRVARVRLLL AGAAALGLVF 
LIVKGSEFRD LASAGISTES HAFFTFYYLL TGFHAAHVAA GILLFAVVGW RCWPAGVEMA 
AAFWHMVDLV WVLILPVVYL LS