Gene Rsph17025_3651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3651 
Symbol 
ID5085510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp538981 
End bp540294 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content66% 
IMG OID640485208 
Producthypothetical protein 
Protein accessionYP_001169824 
Protein GI146279666 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.943877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0762923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGT CCCTGCAGTC CATGACAGCC ATCGTCGCCG CCATCTCGGC CATCGGGTGG 
GCGGGTGCAG CCACGGCGCA GACCGCCGTC GCCGATCCCT CGGCCCCGGT CGAGCACGAG
GGCACGCTGA GGGTGATGAC CAAGTTCGGG ATGCAGCGCC TTGCGCCCTA TTTCGTCGAG
CTGGCGAAGG CGTATGAGGC GCAGCATCCG GGCGTGAAGA TCGAGCTGAT CCAGGAGGAT
GACGACAGCG TCAAGGGCAA GACCAAGACG CTCGTCGCCT CGAACTCGAT CCCCGACGTC
TTCTTCTCGT GGACGGGCAC CTGGGGCGGC AATTTCGTGC GCGGCAAGCG GGCGGTGGAT
CTGACGCCGG TGATCGGGCC GGATACGGAC TGGGGCCGGA CCTTCGCCCC CGCGGCGGTC
GGCGCCTTCG TCTATGAGGG CAAGAATTAT GGCATCCCGC TTTATCTCGA TGCGAAGTTC
ATGGGCTACA ACAAGACCAT CTTCGCCGAT CTGGGGATCT CGGAGCCCGC CACGCTCGAG
GAGATGCTCG AGGCCTGCGA CACGATCAGG GAGGCGGGGA TAACGCCGAT CTCGATCGGC
AACAAGGAGC CGTGGGTGGC GGTCCACTAT CTCGGCCAGC TTCTGGCCTA CAACGTGCCG
AAGGAGGTGC TCGAGCGCGA CTTCGACCCG GCGACGGCCG ACTATTCCGA TCCCGGCTAT
GTCGCCTCGC TCGAGCAGTT CAAGGCGATC GCCGACCGCT GCACCATCGG CGCGGGCATG
AACGGCATTT CCTACCAGAC CGCCATTCAG GAACTGAGCG ACGGCAAGGC CGCGATGTAT
TACCAGGAGA TCATCGAGTT CGACAACGCC GCCTCGGCGA CGACCAAGCT CACGCCCGAG
GAGTTCGGCT TCTTCCCGCT GCCCGCGCCG AAGGAGGCCA AGGGCGATCC GAAGGCGCTC
GAGGGCGCGC CCGAGGGCTA CATGATCTCC TCGGCCTCGG AGAACGTACC GCTCGCGCTT
GATTTCATGA AGTTCGTGAC GACGCAGGCC AATGCCAAGG TGCTGTCGGC CCCGCCCTAT
GGCCAGCCGA GCGCGGTGAT CGGCGGCGCC GATCCGGCCG ATATGAGCCC GGCGGTGGTG
GGCGGCCTCG AGGATATCGC CGAGGCCTCG TATCTCATGC AGTGGCTGGA CACGGTCAAC
CATCCGCGGG TGGCGGCGGC GTGGCTGTCG AACCTCCAGG CCTTCGCCGG CGGCACGGTC
TCGGCCGAAG AGGTCGTGGC CGAGGTCCGC AAGGCCGCCG CCTCGGCCAA GTGA
 
Protein sequence
MKRSLQSMTA IVAAISAIGW AGAATAQTAV ADPSAPVEHE GTLRVMTKFG MQRLAPYFVE 
LAKAYEAQHP GVKIELIQED DDSVKGKTKT LVASNSIPDV FFSWTGTWGG NFVRGKRAVD
LTPVIGPDTD WGRTFAPAAV GAFVYEGKNY GIPLYLDAKF MGYNKTIFAD LGISEPATLE
EMLEACDTIR EAGITPISIG NKEPWVAVHY LGQLLAYNVP KEVLERDFDP ATADYSDPGY
VASLEQFKAI ADRCTIGAGM NGISYQTAIQ ELSDGKAAMY YQEIIEFDNA ASATTKLTPE
EFGFFPLPAP KEAKGDPKAL EGAPEGYMIS SASENVPLAL DFMKFVTTQA NAKVLSAPPY
GQPSAVIGGA DPADMSPAVV GGLEDIAEAS YLMQWLDTVN HPRVAAAWLS NLQAFAGGTV
SAEEVVAEVR KAAASAK