Gene Rsph17025_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3243 
Symbol 
ID5085992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp109525 
End bp110595 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content68% 
IMG OID640484815 
Producthypothetical protein 
Protein accessionYP_001169432 
Protein GI146279274 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.87962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.136088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACTTC TGACGACGAG ACTCCCGGAT CGGCTGAACC GGTTCGTGTT GCGGTGGGCC 
ACCCGACGCA GCCTGACCTA TCGGGTCTGG TTCGCCCTGT GCGCCATCGG GATCTCGACC
GCGCTGCGGT TCGCGGTGGA CGACGTGCTG CCGACTGGCT TTCCCTTTGT CACCTTCTTC
CCCGCGATCA TCCTGACGGC CTTCTTTGCC GGCGCCGCCG CGGGTGCAGG GGTGGCCGTG
GTCACGGGAC TGATTTCCTG GTACTGGTTC ATCGAGCCGA CCGGCAGCCT CGGCTTCTCC
ACCCCGGCCA TGCTGGCGCT GCTCTTCTTC GTCTTCATCG CCATCACCGA CATCCTGCTC
ATCCATCTGA TGACCGAGGC GCTGCACCGA ACGGCGAAGG CCGAGGCCCG CAGTTCGGCC
CTGGCCCATG CGCGCTCGCT CATGTTCCAC GAGCTTCAGC ACCGCGTCTC CAACAACATC
TCGACGCTGG GCGCCCTCCT GCGCCTGCAG GAGCGGCGGC TGATCGACCC CAGGGCACGG
GCGGCGCTGG CCGATGCGCG GGCGCGCCTC GAGGTGGTGG CGCGCCTTCA GCGGCGGCTG
CATGATCCCG CCCGCCAGTC CGTCGATATC GGCGAGTATA TCCGCGGGCT CGCGGCCGAC
ACGATCGAGG CGATGGACGC CGGCACGCGC ATCTCCTGCC GGTTCGAGCT GGAACCCTTC
CGTTCCGAGC CCGATCAGGC CATGCCGCTG GGCCTTGTCA CGAGCGAGCT GCTGATGAAC
GCCTGCGAAC ACGGCTTTGC CGGTGGCGCG TCGGGCACGA TCCTGATCCG TCTGTCCGTG
GCGCATGGCG GCGCGCTTCT CGTCATCGAG GATGATGGGG CCGGGCTGCC CGAGGGCTTC
TCGATCCGCG CAACCACCAG CCTCGGGCTG TCCATCGCGC GCCAGTTCGC CGAACAGATC
GGCGGACAGC TTGTCGTTGG CGCACGATCG GGAGGCGGCA GCCGGTGCGA GCTGTCCTTT
CCCGTCCGAA TGCCGGGTTC GGCCGAGGCC GAACCGCTGA CGGCCGCCTG A
 
Protein sequence
MGLLTTRLPD RLNRFVLRWA TRRSLTYRVW FALCAIGIST ALRFAVDDVL PTGFPFVTFF 
PAIILTAFFA GAAAGAGVAV VTGLISWYWF IEPTGSLGFS TPAMLALLFF VFIAITDILL
IHLMTEALHR TAKAEARSSA LAHARSLMFH ELQHRVSNNI STLGALLRLQ ERRLIDPRAR
AALADARARL EVVARLQRRL HDPARQSVDI GEYIRGLAAD TIEAMDAGTR ISCRFELEPF
RSEPDQAMPL GLVTSELLMN ACEHGFAGGA SGTILIRLSV AHGGALLVIE DDGAGLPEGF
SIRATTSLGL SIARQFAEQI GGQLVVGARS GGGSRCELSF PVRMPGSAEA EPLTAA