Gene Rsph17025_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3215 
Symbol 
ID5085964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp77399 
End bp78523 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID640484787 
Producthypothetical protein 
Protein accessionYP_001169404 
Protein GI146279246 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC AGAGCCTCCG CAACATCCTG CGACTGACGA TCAAGGAACT GCGCGCCATC 
CGCGGCGACC GGGTGATGAT CCTGCTGATG GTCTATGTCT TCACCATCGC GACCTGGCTT
GTTTCGGATG CGGCGAACAC CGACATCCGC AATCTCTCGG TCGCGGTGGT GGACGAAGAC
CGCAGCCAGC TTTCGGGCCG GCTGGTCGGC GCGATCCGCG AGCCGCTCTT CACCCCGCCC
GAGCTTCTGT CGGCGGCCGA GGCCGAGGCG GCGCAGAATG CGGGCCGCAA GGTGCTCGTG
GTCTCGATCC CGCCCGGCTT CGAGCGGCAC CTGCGGCGCG GAGACGGGGC CAGCCTGATG
ATCCTGATCG ACGCCACGGC CGTGTCGCAG GCCGGCAACG GCGCAAGCTT CCTCAACCGG
CTGCTGCTGG ACGAGATCGC GGCCTACCTC CGCCCCGGAG AGCCCGCTTC GGCCCTCGTC
TCGGTCGAGA TCCGCAACCG CTTCAATGAG AACCTCGACG GCACCTGGTT CACCGCCGTC
ATGCAGCTGA TGAACTCGGT CACCATTCTC ACGCTGATCC TTGCCGGCTC GTCCATGATC
CGCGAGCGCG AGCATGGCAC GATCGAGCAT GTGCTGGTGA TGCCGGTCCA TCCTCATGAG
ATTGTCTTCT CGAAGGTGCT GGCCACAACC GCCGTGATCC TCATGGCCTC GGTCCTCAGT
CTGGTCTTCG TGATCAAGGG GGCGATGGGC GTGCCGATCG ACGGGTCGCT GCTTCTCTAT
TCGGCGGGGG CCGCGCTCTA TGTGGTGGCG GTGGCCAGCC TCGGGCTGCT GCTTGCCTCG
TTCACGCACA ACATGGGGCA GTTCGGGCTT CTGGTGCTGC CCGTCATCAT CGTGATGTTC
CAGCTTTCGG GCGGGATCAC GCCGCTCGAA TCCATGCCGG TCTGGCTGCA GATCACCATG
CGCCTCATCA GCCCCTCGCC GCATTTCGTC TCGTTCGCCC AGTCGGTGCT TTACCGAGGG
GCGGGGGTCG AGCTTGTCGT GGGCGAGATG GTGGCCATGG CGGCCATGTC CGGGGTGGCG
TTGACGGTGG TCCTGCGGCG CTTCCGCCGG GTGCTTTCCG CCTGA
 
Protein sequence
MAFQSLRNIL RLTIKELRAI RGDRVMILLM VYVFTIATWL VSDAANTDIR NLSVAVVDED 
RSQLSGRLVG AIREPLFTPP ELLSAAEAEA AQNAGRKVLV VSIPPGFERH LRRGDGASLM
ILIDATAVSQ AGNGASFLNR LLLDEIAAYL RPGEPASALV SVEIRNRFNE NLDGTWFTAV
MQLMNSVTIL TLILAGSSMI REREHGTIEH VLVMPVHPHE IVFSKVLATT AVILMASVLS
LVFVIKGAMG VPIDGSLLLY SAGAALYVVA VASLGLLLAS FTHNMGQFGL LVLPVIIVMF
QLSGGITPLE SMPVWLQITM RLISPSPHFV SFAQSVLYRG AGVELVVGEM VAMAAMSGVA
LTVVLRRFRR VLSA