| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2963 |
|---|
| Symbol | |
|---|
| ID | 5085166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3026375 |
|---|
| End bp | 3027334 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640484534 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001169154 |
|---|
| Protein GI | 146278995 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0383599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA GTGTGGAAGC ATCGCGGCCG GCGCGGGCGC GGCAGGCAGT GATCTTCTGC
TGCGACCGGA ACTATTATCC CTATGCCATG TTCGCGGCGG CGCAGATCGC AGGACGGCAT
CCGCATCGCG GCTTCGACAT CTGCATCGCA TCCCTGGAGG CGATCGAAGA ACCGCCCTCC
CTCTCGGAAC TGGCGGTGCG GCATTGTACG ATAGACGCCG CTCACCTCTT TGCCGATTTC
GGGCTCGACG ATCGCCGGAC GGCCGTCACC TATCTGCGGC TCGTGCTGCC CGAAGCCTTT
TCAGAGGACT ATGACCGGAT CCTCTATCTG GACTCGGACA TCTATATACA GGGAGGAGAT
CTTGGGGCCC TGATCGCCCT GCCGTTGGCA GGACGCCCCC TGGCGGCGGT GCGCGACAAC
AAGCAGTGGC GGACGCCCTC ACGACGCATG GTTGATTTCG ACCGGCTGGG ATTGCCTCAA
AGGCCCTATT TCAACTCGGG CGTCCTGCTC TTTGACGTTC CGGCCTTTCG CGCAGCCAAC
CTGTTGCAGG AGGCGCTCCG CATCGGACGA TCCCAAGGCC GGCAGCTTGT TCGACACGAC
CAGTCCCTGC TGAATGCATG CATGCTGGGT AACTGGGCCG AACTCAGCCC ATCCTGGAAC
TGGCAATATA CATGGTCCTC ACGGCTGTTC GCCGCCATGC TCGGCCCGAA CATCATCCAT
TTCATCGGCC GGTGCAAACC GTGGTGCGAC CCGGACAATC TCCTCTCTCC GCAGTTCGCA
CGGGATCTGC AAATCTTCCT CGCCCGCCAT TTCCCCGATC ATCCACCCCT TCCCCTTGGC
CCCGGAATGC TCCCCGACTC TCTCGCCATG CGTCGAATGC TGATGAAGCA CCTTCTCTCC
TCCGGCAGAC TTGCACGGTA TCTTGAGCGT TTCCCTTCGG ACCTGACGGT AGGCCCATGA
|
|---|
| Protein sequence | MALSVEASRP ARARQAVIFC CDRNYYPYAM FAAAQIAGRH PHRGFDICIA SLEAIEEPPS
LSELAVRHCT IDAAHLFADF GLDDRRTAVT YLRLVLPEAF SEDYDRILYL DSDIYIQGGD
LGALIALPLA GRPLAAVRDN KQWRTPSRRM VDFDRLGLPQ RPYFNSGVLL FDVPAFRAAN
LLQEALRIGR SQGRQLVRHD QSLLNACMLG NWAELSPSWN WQYTWSSRLF AAMLGPNIIH
FIGRCKPWCD PDNLLSPQFA RDLQIFLARH FPDHPPLPLG PGMLPDSLAM RRMLMKHLLS
SGRLARYLER FPSDLTVGP
|
|---|
| |