| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2494 |
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| Symbol | |
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| ID | 5083837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2542506 |
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| End bp | 2543777 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640484056 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001168687 |
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| Protein GI | 146278528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACA GCCGCCTGAT CGCCGAAGTC GAATCCCGCC GCGCCGATCT GGTCGCTCTG
GCGCAGGAAC TGGTGCGCAT CCCCACCCTC AACCCGCCCG GGCGCAACTA CCGCGAGATC
TGCGAGATGC TGGCCGCGCG GCTCGCACCG GCCTTCGACG TCGAACGGAT CCGCGCCGAG
GGCGCGCCGG GCGATTCCGA GGCCCATCCG CGCTGGAACC TGATCGCGCG GCGGGCGGGG
GCGCGGCCGG GCGACTGCGT GCATTTCAAC TCGCACCATG ACGTGGTCGA GGTGGGCCAC
GGCTGGACGC GCGACCCGTT CGGGGCCGAG GTCGAGGGGG ACCGGCTTTA CGGCCGTGGC
GCCTGCGACA TGAAGGGCGG CCTCGCCGCC TCGGTGATCG CGGCCGAGGC CTTCCTCGCC
GTCTGCCCGG ACTTTGCGGG CCGCATCGAG ATTTCGGCCA CCGCCGACGA GGAGTCGGGC
GGCTTTGGCG GCGTGGCTTA CCTCGCCGGG CAGGGCCGCT TTGCCCATGT CCAGCATGTG
CTGATCCCCG AACCGCTGCA CAAGGACCGG ATCTGCCTCG GCCATCGCGG CGTCTGGTGG
GCCGAGGTCG AGACCAGGGG CCGGATCGCC CACGGCTCGA TGCCCTTTCT GGGAGAGAGC
GCGATCCGGC ACATGGGGGC GCTGCTCTCC GAGATCGAGG AGCGGCTCTA TCCGCTGCTC
GCCCGCCGCA CCACCGCCAT GCCGGTAACC CCCGAGGGCG CGCGGCAATC GACGCTCAAC
ATCAACTCGA TCCACGGCGG CGAGCCCGAG CCCGAGCCCG GCTACACCGG CCTGCCCGCC
CCCTGCGTGG CCGACCGTTG CCGCATCGTG ATCGACCGCC GCTTCCTGAT CGAGGAGGAT
CTGGCCGAGG TGAAGGCCGA GTTGCACGCC CTCGCCGCCC GGCTGGCCGA GACCCGCCCC
GGCTTCGCCT TCGAGATCCG GGACCTCTTC GAGGTGCAGC CCACCATGAC CGACCGCGAA
GCCCCCGTGG TGCGCTCGAC CGCCGCCGCC ATCGAGCGGG TTCTGGCGCG GCAGGCGGAT
TATGTCGTTT CGCCCGGCAC CTACGATCAG AAGCACATCG ACCGGATCGG CAAGCTGAAG
AACTGCATCG CCTACGGGCC GGGGCTGCTG CATCTGGCGC ACCAGCCCGA CGAGTGGGTG
GGCATCCAGG ACATGCTGGA CAGCGCCAAG GTCATGGCGC TGGTGCTGGC CGACCTGCTC
GACCGTCCGT GA
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| Protein sequence | MKDSRLIAEV ESRRADLVAL AQELVRIPTL NPPGRNYREI CEMLAARLAP AFDVERIRAE
GAPGDSEAHP RWNLIARRAG ARPGDCVHFN SHHDVVEVGH GWTRDPFGAE VEGDRLYGRG
ACDMKGGLAA SVIAAEAFLA VCPDFAGRIE ISATADEESG GFGGVAYLAG QGRFAHVQHV
LIPEPLHKDR ICLGHRGVWW AEVETRGRIA HGSMPFLGES AIRHMGALLS EIEERLYPLL
ARRTTAMPVT PEGARQSTLN INSIHGGEPE PEPGYTGLPA PCVADRCRIV IDRRFLIEED
LAEVKAELHA LAARLAETRP GFAFEIRDLF EVQPTMTDRE APVVRSTAAA IERVLARQAD
YVVSPGTYDQ KHIDRIGKLK NCIAYGPGLL HLAHQPDEWV GIQDMLDSAK VMALVLADLL
DRP
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