Gene Rsph17025_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2458 
Symbol 
ID5084847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2508249 
End bp2508581 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content71% 
IMG OID640484020 
Productbranched-chain amino acid transport 
Protein accessionYP_001168651 
Protein GI146278492 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.478648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.376832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA ACACCACCCA GGTCTGGACC GTGATGATCG TGCTGGGGCT CGGCACGTTC 
CTGTTGCGCT TTTCCTTCCT CGGGCTGATC GGCAGCCGGT CGCTGCCGGT CTGGGCGCTG
AGGCTGCTGC GCTACACGCC CGTGGCGGTC CTGCCGGGGC TGGTCGCGCC GCTCGTCCTC
TGGCCGCCGG CCACCGGGGG CGTCACCGAT CCCGCGCGCC TGGCCGCCGC CATCGCGACG
GTCGGGGTCG GGCTCGTGAC GCGCAACGTG TTCGCCGCGA TCTTCGGCGG GGCGGCCGTG
CTTTACCTCA CGCCCTGGCT GATGGGGCTC TGA
 
Protein sequence
MIENTTQVWT VMIVLGLGTF LLRFSFLGLI GSRSLPVWAL RLLRYTPVAV LPGLVAPLVL 
WPPATGGVTD PARLAAAIAT VGVGLVTRNV FAAIFGGAAV LYLTPWLMGL