Gene Rsph17025_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2012 
Symbol 
ID5082626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2054840 
End bp2055442 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content66% 
IMG OID640483574 
ProductOmpW family protein 
Protein accessionYP_001168208 
Protein GI146278049 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACGA TGATTCCCGC GGCCGTCGCC GCAAGCCTCG CCTTCCTCGC CGCAGCGCCC 
GCCGCCGCGC AATCGGCCGG CGAGATGACT TTCGGCCTCG GGCTCGGCAG CGTGATGCCG
AAGTCCGACA ACGGCACGCT GACCGCGGGC GATCTGGAGG TGGGCAACGA GATCCAGCCG
ACGATCACCT TCGAGTACTT CATCCGCGAC AATCTGGGGA TCGAGATCCT CGCGGCCACC
CCCTTCAAGC ACGATCTGAA AGTGGATGGC TCCGGCATCG GCTCGATCAA GCACCTGCCG
CCGACGGTGA CGCTGCAGTA TCACTTCCCG ACCGGCGGCG CCTTCGCGCC CTTCATCGGG
GCGGGCGTGA CCTATGTGAC CTTCTTCGAG GAAAGCAGCC CGCTCGGCGA TCTGAAGCTT
GACGACAGCT GGGGCCTCTC GGTCCATGCG GGCTTCGACT ACTGGCTGAA CGACCGCAAC
GCGATCCGCG CCGACGTCCG CTGGATGGAC ATCGACAGCG ACGTGACGCT CGACGGCGGG
GACCTCGGCA CGGCCGAGAT CGATCCCGTG GTGGTGGGCG TGTCCTACAT CTGGAAATTC
TGA
 
Protein sequence
MHTMIPAAVA ASLAFLAAAP AAAQSAGEMT FGLGLGSVMP KSDNGTLTAG DLEVGNEIQP 
TITFEYFIRD NLGIEILAAT PFKHDLKVDG SGIGSIKHLP PTVTLQYHFP TGGAFAPFIG
AGVTYVTFFE ESSPLGDLKL DDSWGLSVHA GFDYWLNDRN AIRADVRWMD IDSDVTLDGG
DLGTAEIDPV VVGVSYIWKF