Gene Rsph17025_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1932 
Symbol 
ID5084057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1974977 
End bp1975687 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID640483494 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001168128 
Protein GI146277969 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG TTCCTGGTGG GGGCATCGCA TGCGCAGGAG CGCAGCGGGT GCCGGCACGC 
ACGATCGGTG ACATATTGAT CGTCGATGAC CATCCGCTGA TGTGCGACGC GCTGGCGATG
ACACTCACCC ATGCCTTCGG GCTGAAGCGG GTGCGCAGCG CGGCCAGCCT GTCGGCCGCC
GAGACGCTGC TGCGCGAGGG CCCGCTGCCG GATGCCATCG TGCTCGACCT GAATCTGCCC
GACGTGCGGG GCATCGAAGG GGTGATGAGC CTTCGCAAGC TCGCGCGCGC CGTTCCGCTG
ACGGTGATCT CGGCCGAGGT CGATGCCGAG ATGGTGACGG CGGTGATGGC GGCGGGGGCG
ACGGGCTATG TCTCCAAGAG CCTGCCGCGG CCGCAGATGA TCGAGGCCTT CGGGCGGATG
TGGGCCGGCG AGCCGGTGAC GCCCGAGGAA TATGACGCCG ACGGCGGCGG CGAGGACAGT
GGCGAGCAGA TGCGCGAACT GGCCCGCAGC TTTGCCACCC TCACGCCGCA GCAGATGAAC
ATCCTGCGGC TGATCTGTCA GGGGCGGCCG AACAAGCTGA TCTCCTACGA ACTCTCGATC
GCCGAGGCGA CCGTCAAGAC CCACATCGCT GCCATCATGT CCAAGATCAA CGTGAGGAAC
CGCACCCAGG CAGCCCTTCT GGCCAGCAAG GCGCGGATCT TCGCGCGCTA G
 
Protein sequence
MGHVPGGGIA CAGAQRVPAR TIGDILIVDD HPLMCDALAM TLTHAFGLKR VRSAASLSAA 
ETLLREGPLP DAIVLDLNLP DVRGIEGVMS LRKLARAVPL TVISAEVDAE MVTAVMAAGA
TGYVSKSLPR PQMIEAFGRM WAGEPVTPEE YDADGGGEDS GEQMRELARS FATLTPQQMN
ILRLICQGRP NKLISYELSI AEATVKTHIA AIMSKINVRN RTQAALLASK ARIFAR