Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1880 |
Symbol | |
ID | 5084305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1930550 |
End bp | 1931140 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483441 |
Product | NnrU family protein |
Protein accession | YP_001168076 |
Protein GI | 146277917 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.316868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTTG TCAGTCTGCC GGATAGTCGC GTCATGTTCC TCCTGTCGAT CGGTATCTTC CTCTGGGTCG GGGGCCACCT GTTCAAGCGG ATCTTCCCCG ATCTCCGCGC CCGGATGGGC GACCCCGGAA AGGGCCTCAT CACGATCATC ATCACGGTCG GGCTCGGGCT GATGATCTAC GGCTACCGGA CGGCGGACTA CATCCCCGTC TATATACCGC TGCCCGAGAT CGGCTATCTG AACAACCTGC TCATGCTGGT TGCCATCGTG CTGCTGGGCG CGGGGGTGCT GAAGGGGGTG ATCTGGACGC GCATCCGGCA CCCGCAGTTC CTGGCCACCA TGATCTGGGC CACCGCGCAT CTGCTCGTGA ACGGAGACCT CGCCGCGATC CTGCTGTTCG GCAGCATGTG GCTCTGGGCG GCGGGCTCGA TCCTGCTGAT CAATGCGCAG GAGGGCGAGT GGGTGCGCCC ACCGCCGGGA CCGCTGCGGC GCGACGCCGT GCTGGTGGGG ATCGGGCTGG CCCTTTACGG CGCGATCACC TCGACCCACA TCTACCTCGA CCACAATCCC TTCATGGGCA GCTACTACTG A
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Protein sequence | MHLVSLPDSR VMFLLSIGIF LWVGGHLFKR IFPDLRARMG DPGKGLITII ITVGLGLMIY GYRTADYIPV YIPLPEIGYL NNLLMLVAIV LLGAGVLKGV IWTRIRHPQF LATMIWATAH LLVNGDLAAI LLFGSMWLWA AGSILLINAQ EGEWVRPPPG PLRRDAVLVG IGLALYGAIT STHIYLDHNP FMGSYY
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