Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1752 |
Symbol | |
ID | 5083658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1788510 |
End bp | 1789454 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640483312 |
Product | peptidase S49 |
Protein accession | YP_001167950 |
Protein GI | 146277791 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.341748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAAG ACATCTCCGC GCTCGTCGCG GCCATCCGCG CGCACCCGTG GGCCATCCAG CCCGCTTACC TTGAGGCCAT CGAGGCAATC GCGGCTCGGG CTTTCGAAGC CGGCACCCTT CTGCCGGTGG CGGAAGACGG CCACCAGGCG CGACTGCAGG AGAGCCTCTC GGCGGTCGCG GCTGTGGGCA CTCCGTTGGA GGGGGCCCGA ATGAGCACGG TTCGGGATGG GGTGGCGGTG GTGCCTGTAT TCGGCCCCAT CTTTCCCCGC GCCAACATGA TCAACAGCTC GGCGGGCGGC ACATCGCTCG ACGCGATCAT GCGCGACATG CGGGTGGCGC TGGCCGACGG CAACGTCGAA CGGATCGTCA TGGTGTTCGA TACCCCTGGC GGCGTCGTGT CTGGCTTGGG AGAGGCGGCC GAAGGGATCC GGGGCGCGAG CAAGCCGATT ACCGGCTTTG TCACCGGGAT CGCCGCCAGC GCCGGCTACT GGCTGGCCAG TCAGGCTGCA GAGCTGGTGG TGGAGCGTGC AGCCTCTGTC GGTTCGATCG GGGTGGTCGC CTCGACATCG AGGCAGGAGG GCCCCGGCGC GGATGGCCGG CGATCCTACG AGATCGTCAG TTCCGGCGCG CCTCGCAAGC GCCCTGATCC CTCCACGGAT GAGGGTCGGG CCGCGATTCA GGAGGAGGTG GATGCCATCG AAGCCGTGTT TGTCGGCGAC GTGGCGAAAG GCCGGAAAAC GACCGCCACC ACCGTGCTCT CCAGCTTTGG CCGCGGGGCG ATGGTCCCCG CCGGCGCCGC CATCGATGCT GGCATGGCAG ACAGGATCGG CACGCTCGAG AGCGTGCTGC GCAATCCCGG GCGCACCCGG GTCAACACCG GAGGCCGCCG TGCGCTGGCC GCCGCCGAAG TCGAAACGCG GCGTCGGGCC GCAGATAGGA GCTGA
|
Protein sequence | MTKDISALVA AIRAHPWAIQ PAYLEAIEAI AARAFEAGTL LPVAEDGHQA RLQESLSAVA AVGTPLEGAR MSTVRDGVAV VPVFGPIFPR ANMINSSAGG TSLDAIMRDM RVALADGNVE RIVMVFDTPG GVVSGLGEAA EGIRGASKPI TGFVTGIAAS AGYWLASQAA ELVVERAASV GSIGVVASTS RQEGPGADGR RSYEIVSSGA PRKRPDPSTD EGRAAIQEEV DAIEAVFVGD VAKGRKTTAT TVLSSFGRGA MVPAGAAIDA GMADRIGTLE SVLRNPGRTR VNTGGRRALA AAEVETRRRA ADRS
|
| |